Yuan, Z.-L., Wu, Q., Xu, L., Druzhinina, I., Stukenbrock, E. H., Nieuwenhuis, B. P. S., Zhong, Z., Liu, Z.-J., Wang, X., Cai, F., Kubicek, C. P., Shan, X., Wang, J., Shi, G., Peng, L., & Martin, F. M. (2022). Genomic landscape of a relict fir-associated fungus reveals rapid convergent adaptation towards endophytism. The ISME Journal, 16(5), 1294–1305. https://doi.org/10.1038/s41396-021-01176-6 ( reposiTUm)

Brandstätter, C., Fricko, N., Rahimi, M., Fellner, J., Ecker-Lala, W., & Druzhinina, I. S. (2022). The microbial metabolic activity on carbohydrates and polymers impact the biodegradability of landfilled solid waste. Biodegradation, 33(1), 71–85. https://doi.org/10.1007/s10532-021-09967-6 ( reposiTUm)

Daly, P., Cai, F., Kubicek, C. P., Jiang, S., Grujic, M., Rahimi, M. J., Sheteiwy, M. S., Giles, R., Riaz, A., de Vries, R. P., Akcapinar, G. B., Wei, L., & Druzhinina, I. S. (2021). From lignocellulose to plastics: Knowledge transfer on the degradation approaches by fungi. Biotechnology Advances, 50(107770), 107770. https://doi.org/10.1016/j.biotechadv.2021.107770 ( reposiTUm)

Cai, F., & Druzhinina, I. S. (2021). In honor of John Bissett: authoritative guidelines on molecular identification of Trichoderma. Fungal Diversity, 107(1), 1–69. https://doi.org/10.1007/s13225-020-00464-4 ( reposiTUm)

Lücking, R., Aime, C., Robbertse, B., Miller, A. N., Aoki, T., Ariyawansa, H. A., Cardinali, G., Crous, P. W., Druzhinina, I., & Geiser, D. M. (2021). Fungal taxonomy and sequence-based nomenclature. Nature Microbiology, 6(5), 540–548. https://doi.org/10.1038/s41564-021-00888-x ( reposiTUm)

van Bohemen, A.-I., Ruiz, N., Zalouk-Vergnoux, A., Michaud, A., Robiou du Pont, T., Druzhinina, I., Atanasova, L., Prado, S., Bodo, B., Meslet Cladiere, L., Cochereau, B., Bastide, F., Maslard, C., Guillemette, T., & Pouchus, Y. F. (2021). Pentadecaibins I−V: 15-Residue Peptaibols Produced by a Marine-DerivedTrichodermasp. of theHarzianumClade. Journal of Natural Products, 84(4), 1271–1282. https://doi.org/10.1021/acs.jnatprod.0c01355 ( reposiTUm)

Cai, F., Zhao, Z., Gao, R., Chen, P., Ding, M., Jiang, S., Fu, Z., Xu, P., Chenthamara, K., Shen, Q., Bayram Akcapinar, G., & Druzhinina, I. S. (2021). The pleiotropic functions of intracellular hydrophobins in aerial hyphae and fungal spores. PLoS Genetics, 17(11), e1009924. https://doi.org/10.1371/journal.pgen.1009924 ( reposiTUm)

Zhao, Z., Cai, F., Gao, R., Ding, M., Jiang, S., Chen, P., Pang, G., Chenthamara, K., Shen, Q., Bayram Akcapinar, G., & Druzhinina, I. S. (2021). At least three families of hyphosphere small secreted cysteine-rich proteins can optimize surface properties to a moderately hydrophilic state suitable for fungal attachment. Environmental Microbiology, 23(10), 5750–5768. https://doi.org/10.1111/1462-2920.15413 ( reposiTUm)

Cai, F., Gao, R., Zhao, Z., Ding, M., Jiang, S., Yagtu, A. C., Zhu, H., Zhang, J., Ebner, T., Mayrhofer-Reinhartshuber, M., Kainz, P., Chenthamara Kariyankode, K., Bayram Akcapinar, G., Shen, Q., & Druzhinina, I. (2020). Evolutionary compromises in fungal fitness: hydrophobins can hinder the adverse dispersal of conidiospores and challenge their survival. ISME JOURNAL, 14(10), 2610–2624. https://doi.org/10.1038/s41396-020-0709-0 ( reposiTUm)

Andersson, M. A., Salo, J., Kedves, O., Kredics, L., Druzhinina, I., Kurnitski, J., & Salonen, H. (2020). Bioreactivity, Guttation and Agents Influencing Surface Tension ofWater Emitted by Actively Growing Indoor Mould Isolates. Microorganisms, 8(12), 1940. https://doi.org/10.3390/microorganisms8121940 ( reposiTUm)

Gao, R., Ding, M., Jiang, S., Zhao, Z., Chenthamara, K., Shen, Q., Cai, F., & Druzhinina, I. S. (2020). The Evolutionary and Functional Paradox of Cerato-plataninsin Fungi. Applied and Environmental Microbiology, 86(13). https://doi.org/10.1128/aem.00696-20 ( reposiTUm)

Yuan, Z., Druzhinina, I. S., Wang, X., Zhang, X., Peng, L., & Labbé, J. (2020). Insight into a highly polymorphic endophyte isolated from the roots of the halophytic seepweed Suaeda salsa: Laburnicola rhizohalophila sp. nov. (Didymosphaeriaceae, Pleosporales). Fungal Biology, 124(5), 327–337. https://doi.org/10.1016/j.funbio.2019.10.001 ( reposiTUm)

Pérez-Llano, Y., Rodríguez-Pupo, E. C., Druzhinina, I. S., Chenthamara, K., Cai, F., Gunde-Cimerman, N., Zalar, P., Gostinčar, C., Kostanjšek, R., Folch-Mallol, J. L., Batista-García, R. A., & Sánchez-Carbente, M. del R. (2020). Stress Reshapes the Physiological Response of Halophile Fungi to Salinity. Cells, 9(3), 525. https://doi.org/10.3390/cells9030525 ( reposiTUm)

Ding, M. ‐Y., Chen, W., Ma, X. ‐C., Lv, B. ‐W., Jiang, S. ‐Q., Yu, Y. ‐N., Rahimi, M. J., Gao, R. ‐W., Zhao, Z., Cai, F., & Druzhinina, I. S. (2020). Emerging salt marshes as a source of Trichoderma arenarium sp. nov. and other fungal bioeffectors for biosaline agriculture. Journal of Applied Microbiology, 130(1), 179–195. https://doi.org/10.1111/jam.14751 ( reposiTUm)

Hönigsberger, M., Pretzer, C., Rahimi, M., Kopchinskiy, A., Parich, A., Laciny, A., Metscher, B., Chan, C. M., Lim, L., Salim, K. A., Zettel, H., Druzhinina, I., & Schuhmacher, R. (2020). Strong antimicrobial and low insecticidal activity of mandibular gland reservoir content in Bornean “exploding ants” Colobopsis explodens. MYRMECOLOGICAL NEWS, 30, 201–212. https://doi.org/10.25849/myrmecol.news_030:201 ( reposiTUm)

Lücking, R., Aime, C., Robbertse, B., Miller, A. N., Ariyawansa, H. A., Aoki, T., Cardinali, G., Crous, P. W., Druzhinina, I., Geiser, D. M., Hawksworth, D., Hyde, K. D., Irinyi, L., Jeewon, R., Johnston, P., Kirk, P. M., Malosso, E., May, T., Meyer, W., & Schoch, C. (2020). Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding? IMA FUNGUS, 11, Article 14. https://doi.org/10.1186/s43008-020-00033-z ( reposiTUm)

Grujić, M., Dojnov, B., Potočnik, I., Atanasova, L., Duduk, B., Srebotnik, E., Druzhinina, I. S., Kubicek, C. P., & Vujčić, Z. (2019). Superior cellulolytic activity of Trichoderma guizhouense on raw wheat straw. World Journal of Microbiology and Biotechnology, 35(194). https://doi.org/10.1007/s11274-019-2774-y ( reposiTUm)

Hatvani, L., Homa, M., Chenthamara, K., Cai, F., Kocsubé, S., Atanasova, L., Mlinaric-Missoni, E., Manikandan, P., Revathi, R., Dóczi, I., Bogáts, G., Narendran, V., Büchner, R., Vágvölgyi, C., Druzhinina, I. S., & Kredics, L. (2019). Agricultural systems as potential sources of emerging human mycoses caused by Trichoderma: a successful, common phylotype of Trichoderma longibrachiatum in the frontline. FEMS Microbiology Letters, 366(21). https://doi.org/10.1093/femsle/fnz246 ( reposiTUm)

Marik, T., Tyagi, C., Balázs, D., Urbán, P., Szepesi, Á., Bakacsy, L., Endre, G., Rakk, D., Szekeres, A., Andersson, M. A., Salonen, H., Druzhinina, I. S., Vágvölgyi, C., & Kredics, L. (2019). Structural Diversity and Bioactivities of Peptaibol Compounds From the Longibrachiatum Clade of the Filamentous Fungal Genus Trichoderma. Frontiers in Microbiology, 10. https://doi.org/10.3389/fmicb.2019.01434 ( reposiTUm)

Kubicek, C. P., Steindorff, A. S., Chenthamara, K., Manganiello, G., Henrissat, B., Zhang, J., Cai, F., Kopchinskiy, A. G., Kubicek, E. M., Kuo, A., Baroncelli, R., Sarrocco, S., Noronha, E. F., Vannacci, G., Shen, Q., Grigoriev, I. V., & Druzhinina, I. S. (2019). Evolution and comparative genomics of the most common Trichoderma species. BMC Genomics, 20(485). https://doi.org/10.1186/s12864-019-5680-7 ( reposiTUm)

Hoenigsberger, M., Kopchinskiy, A., Bueschl, C., Parich, A., Laciny, A., Zettel, H., Salim, K., Lim, L., Druzhinina, I., & Schuhmacher, R. (2019). Volatiles from the Mandibular Gland Reservoir Content of Colobopsis explodens Laciny and Zettel, 2018, Worker Ants (Hymenoptera: Formicidae). Molecules, 24(19), 3468. https://doi.org/10.3390/molecules24193468 ( reposiTUm)

Zhang, J., Miao, Y., Rahimi, M. J., Zhu, H., Steindorff, A., Schiessler, S., Cai, F., Pang, G., Chenthamara Kariyankode, K., Xu, Y., Kubicek, C. P., Shen, Q., & Druzhinina, I. S. (2019). Guttation capsules containing hydrogen peroxide: an evolutionarily conserved NADPH oxidase gains a role in wars between related fungi. Environmental Microbiology, 21(8), 2644–2658. https://doi.org/10.1111/1462-2920.14575 ( reposiTUm)

Zettel, H., Balaka, P., Yamane, S., Laciny, A., Lim, L., & Druzhinina, I. (2018). New mimetic ants from Southeast Asia - the Camponotus (Myrmamblys) inquilinus group (Hymenoptera: Formicidae: Camponotini). Zeitschrift Der Arbeitsgemeinschaft Österreichischer Entomologen, 70, 125–174. http://hdl.handle.net/20.500.12708/144665 ( reposiTUm)

Kamravamanesh, D., Kovacs, T., Pflügl, S., Druzhinina, I., Kroll, P., Lackner, M., & Herwig, C. (2018). Increased poly-β-hydroxybutyrate production from carbon dioxide in randomly mutated cells of cyanobacterial strain Synechocystis sp. PCC 6714: Mutant generation and characterization. Bioresource Technology, 266, 34–44. https://doi.org/10.1016/j.biortech.2018.06.057 ( reposiTUm)

Zettel, H., Laciny, A., Jaitrong, W., Syaukani, S., Kopchinskiy, A., & Druzhinina, I. (2018). Evidence of predation in two species of the Colobopsis cylindrica group (Hymenoptera: Formicidae: Camponotini). Asian Myrmecology, 10, 12. https://doi.org/10.20362/am.010011 ( reposiTUm)

Mukherjee, P. K., Hurley, J. F., Taylor, J. T., Puckhaber, L., Lehner, S., Druzhinina, I., Schumacher, R., & Kenerley, C. M. (2018). Ferricrocin, the intracellular siderophore of Trichoderma virens, is involved in growth, conidiation, gliotoxin biosynthesis and induction of systemic resistance in maize. Biochemical and Biophysical Research Communications, 505(2), 606–611. https://doi.org/10.1016/j.bbrc.2018.09.170 ( reposiTUm)

du Plessis, I. L., Druzhinina, I. S., Atanasova, L., Yarden, O., & Jacobs, K. (2018). The diversity of Trichoderma species from soil in South Africa, with five new additions. Mycologia, 110(3), 559–583. https://doi.org/10.1080/00275514.2018.1463059 ( reposiTUm)

Chadha, S., Mehetre, S. T., Bansal, R., Kuo, A., Aerts, A., Grigoriev, I. V., Druzhinina, I. S., & Mukherjee, P. K. (2018). Genome‑wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships. Fungal Biology and Biotechnology, 5(12). https://doi.org/10.1186/s40694-018-0056-3 ( reposiTUm)

Touati, I., Ruiz, N., Thomas, O., Druzhinina, I. S., Atanasova, L., Tabbene, O., Elkahoui, S., Benzekri, R., Bouslama, L., Pouchus, Y. F., & Limam, F. (2018). Hyporientalin A, an anti-Candida peptaibol from a marine Trichoderma orientale. World Journal of Microbiology and Biotechnology, 34(98). https://doi.org/10.1007/s11274-018-2482-z ( reposiTUm)

Druzhinina, I., Chenthamara-Kariyankode, K., Zhang, J., Atanasova, L., Yang, D., Miao, Y., Rahimi, M., Grujic, M., Cai, F., Pourmehd, S., Abu Salim, K., Pretzer, C., Kopchinskiy, A. G., Henrissat, B., Kuo, A., Hundley, H., Wang, M., Aerts, A., Salamov, A., & Kubicek, P. C. (2018). Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts. PLoS Genetics, 14(4), e1007322. https://doi.org/10.1371/journal.pgen.1007322 ( reposiTUm)

Laciny, A., Zettel, H., Kopchinskiy, A., Pretzer, C., Pal, A., Abu Salim, K., Javad Rahimi, M., Hoenigsberger, M., Lim, L., Jaitrong, W., & Druzhinina, I. S. (2018). Colobopsis explodens sp. n., model species for studies on “exploding ants” (Hymenoptera, Formicidae), with biological notes and first illustrations of males of the Colobopsis cylindrica group. ZooKeys, 751, 1–40. https://doi.org/10.3897/zookeys.751.22661 ( reposiTUm)

Hoenigsberger, M., Kopchinskiy, A. G., Parich, A., Hiller, K., Laciny, A., Zettel, H., Lim, L. B. L., Salim, K. A., Druzhinina, I. S., & Schuhmacher, R. (2018). Isolation of Mandibular Gland Reservoir Contents from Bornean “Exploding Ants” (Formicidae) for Volatilome Analysis by GC-MS and MetaboliteDetector. Journal of Visualized Experiments, 138. https://doi.org/10.3791/57652 ( reposiTUm)

Przylucka, A., Akcapinar, G. B., Chenthamara, K., Cai, F., Grujic, M., Karpenko, J., Livoi, M., Shen, Q., Kubicek, C. P., & Druzhinina, I. S. (2017). HFB7 - A novel orphan hydrophobin of the Harzianum and Virens clades of Trichoderma, is involved in response to biotic and abiotic stresses. Fungal Genetics and Biology, 102, 63–76. https://doi.org/10.1016/j.fgb.2017.01.002 ( reposiTUm)

Pretzer, C., Druzhinina, I., Amaro, C., Benediktsdottir, E., Hedenström, I., Hervio-Heath, D., Huhulescu, S., Schets, F., Farnleitner, A. H., & Kirschner, A. K. T. (2017). High genetic diversity of Vibrio cholerae in the European lake Neusiedler See is associated with intensive recombination in the reed habitat and the long-distance transfer of strains. Environmental Microbiology, 19(1), 328–344. http://hdl.handle.net/20.500.12708/146378 ( reposiTUm)

Przylucka, A., Bayram Akcapinar, G., Bonazza, K., Machado Mello De Sousa, T., Mach-Aigner, A. R., Lobanov, V., Grothe, H., Kubicek, C. P., Reimhult, E., & Druzhinina, I. (2017). COMPARATIVE PHYSIOCHEMICAL ANALYSIS OF HYDROPHOBINS PRODUCED IN ESCHERICHIA COLI AND PICHIA PASTORIS. Colloids and Surfaces B: Biointerfaces, 159, 913–923. https://doi.org/10.1016/j.colsurfb.2017.08.058 ( reposiTUm)

Druzhinina, I., Laminger, T., Kamravamanesh, D., Pflügl, S., Mauschitz, G., Mach, R. L., Herwig, C., & Friedl, A. (2017). Less plastic waste in the future. Open Access Government, 16, 312–313. http://hdl.handle.net/20.500.12708/147061 ( reposiTUm)

Druzhinina, I. (2017). Trichoderma é tão poderoso que seu uso na agricultura requer cuidados especiais. Revista Integração, #?(Especial Agro), 38–43. http://hdl.handle.net/20.500.12708/147266 ( reposiTUm)

Qin, Y., Pan, X., Kubicek, C., Druzhinina, I., Chenthamara, K., Labbé, J., & Yuan, Z. (2017). Diverse Plant-Associated Pleosporalean Fungi from Saline Areas: Ecological Tolerance and Nitrogen-Status Dependent Effects on Plant Growth. Frontiers in Microbiology, 8. https://doi.org/10.3389/fmicb.2017.00158 ( reposiTUm)

Druzhinina, I., & Kubicek, C. P. (2017). Genetic engineering of Trichoderma reesei cellulases and their production. Microbial Biotechnology, 10(6), 1485–1499. http://hdl.handle.net/20.500.12708/147241 ( reposiTUm)

Laciny, A., Zettel, H., Kopchinskiy, A., & Druzhinina, I. (2017). Auf den Spuren der “explodierenden” Ameisen. Das Naturhistorische, #?(Frühling 2017), 3–5. http://hdl.handle.net/20.500.12708/147256 ( reposiTUm)

Druzhinina, I. (2017). Using Mother Nature to Help Clean Up Mother Nature. Scientia.Global, #?(#113), 93–96. http://hdl.handle.net/20.500.12708/147286 ( reposiTUm)

Miao, Y., Li, P., Li, G., Liu, D., Druzhinina, I., Kubicek, C. P., Shen, Q., & Zhang, R. (2017). Two degradation strategies for overcoming the recalcitrance of natural lignocellulosic xylan by polysaccharides-binding GH1 0 and GH11 xylanases of filamentous fungi. Environmental Microbiology, 19(3), 1054–1064. http://hdl.handle.net/20.500.12708/146476 ( reposiTUm)

Marik, T., Urban, P., Tyagi, C., Szekeres, A., Leitgeb, B., Vagvölgyi, M., Manczinger, L., Druzhinina, I., Vágvölgyi, C., & Kredics, L. (2017). Diversity Profile and Dynamics of Peptaibols Produced by Green Mould Trichoderma Species in Interactions with Their Hosts Agaricus bisporus and Pleurotus ostreatus. Chemistry and Biodiversity, 14(6). http://hdl.handle.net/20.500.12708/147822 ( reposiTUm)

Laciny, A., Zettel, H., Metscher, B., Kamariah, A. S., Kopchinskiy, A., Pretzer, C., & Druzhinina, I. (2017). Morphological variation and mermithism in female castes of Colobopsis sp. nrSA, a Bornean “exploding ant” of the Colobopsis cylindrica group (Hymenoptera: Formicidae). Myrmecological News, 24, 91–106. https://doi.org/10.25849/myrmecol.news_024:091 ( reposiTUm)

Zhang, J., Akcapinar, G. B., Atanasova, L., Rahimi, M., Przylucka, A., Yang, D., Kubicek, C. P., Zhang, R., Shen, Q., & Druzhinina, I. (2016). The neutral metallopeptidase NMP1 of Trichoderma guizhouense is required for mycotrophy and self-defence. Environmental Microbiology, 18(2), 580–597. http://hdl.handle.net/20.500.12708/148647 ( reposiTUm)

Druzhinina, I. S., Kubicek, E. M., & Kubicek, C. P. (2016). Several steps of lateral gene transfer followed by events of “birth-and-death” evolution shaped a fungal sorbicillinoid biosynthetic gene cluster. BMC Evolutionary Biology, 16(269). https://doi.org/10.1186/s12862-016-0834-6 ( reposiTUm)

Davidson, D. W., Kopchinskiy, A., Abu Salim, K., Grujic, M., Lim, L., Chan, C. M., Jones, T. H., Casamatta, D., Atanasova, L., & Druzhinina, I. (2016). Nutrition of Borneo’s “Exploding” Ants (Hymenoptera: Formicidae: Colobopsis): A Preliminary Assessment. Biotropica, 48(4), 518–527. http://hdl.handle.net/20.500.12708/149332 ( reposiTUm)

Druzhinina, I. S., Kopchinskiy, A. G., Kubicek, E. M., & Kubicek, C. P. (2016). A complete annotation of the chromosomes of the cellulase producer Trichoderma reesei provides insights in gene clusters, their expression and reveals genes required for fitness. Biotechnology for Biofuels, 9(75). https://doi.org/10.1186/s13068-016-0488-z ( reposiTUm)

de Man, T., Stajich, J., Kubicek, C. P., Teiling, C., Chenthamara-Kariyankode, K., Atanasova, L., & Druzhinina, I. (2016). Small genome of the fungus Escovopsis weberi, a specialized disease agent of ant agriculture. Proceedings of the National Academy of Sciences, 113(13), 3567–3572. http://hdl.handle.net/20.500.12708/149334 ( reposiTUm)

Laciny, A., Zettel, H., & Druzhinina, I. (2016). Workers, soldiers, and gynes - morphometric characterization and description of the female castes of Camponotus singularis (Smith, 1858) (Hymenoptera, Formicidae). Deutsche Entomologische Zeitschrift, 63(2), 183–193. https://doi.org/10.3897/dez.63.9435 ( reposiTUm)

Yuan, Z., Druzhinina, I. S., Labbé, J., Redman, R., Qin, Y., Rodriguez, R., Zhang, C., Tuskan, G. A., & Lin, F. (2016). Specialized Microbiome of a Halophyte and its Role in Helping Non-Host Plants to Withstand Salinity. Scientific Reports, 6(32467). https://doi.org/10.1038/srep32467 ( reposiTUm)

Qin, Y., Druzhinina, I. S., Pan, X., & Yuan, Z. (2016). Microbially Mediated Plant Salt Tolerance and Microbiome-based Solutions for Saline Agriculture. Biotechnology Advances, 34(7), 1245–1259. https://doi.org/10.1016/j.biotechadv.2016.08.005 ( reposiTUm)

Ribitsch, D., Herrero-Acero, E., Przylucka, A., Zitzenbacher, S., Marold, A., Gamerith, C., Tscheließnig, R., Jungbauer, A., Rennhofer, H., Lichtenegger, H., Amenitsch, H., Bonazza, K., Kubicek, C. P., Druzhinina, I., & Gübitz, G. (2015). Enhanced Cutinase-Catalyzed Hydrolysis of Polyethylene Terephthalate by Covalent Fusion to Hydrophobins. Applied and Environmental Microbiology, 81(11), 3586–3592. http://hdl.handle.net/20.500.12708/151050 ( reposiTUm)

Marik, T., Szekeres, A., Druzhinina, I., Vágvölgyi, C., & Kredics, L. (2015). Sequential diversity of peptaibol profiles of Trichoderma species causing green mould disease of cultivated mushrooms. Acta Microbiologica et Immunologica Hungarica, 62(Supplement), 180–181. http://hdl.handle.net/20.500.12708/151046 ( reposiTUm)

Yang, D., Pomraning, K. R., Kopchinskiy, A., Karimi Aghcheh, R., Atanasova, L., Chenthamara-Kariyankode, K., Baker, S. E., Zhang, R., Shen, Q., Freitag, M., Kubicek, C. P., & Druzhinina, I. (2015). Genome Sequence and Annotation of Trichoderma parareesei, the Ancestor of the Cellulase Producer Trichoderma reesei. Genome Announcements, 3(4), 1. http://hdl.handle.net/20.500.12708/151051 ( reposiTUm)

Mpika, J., Kébé Boubacar, I., Issali, A. E., N´Guessan, K. F., Druzhinina, I., Komon-Zelazowska, M., Kubicek, C. P., & Aké, S. (2015). Efficacité au Champ de Quatre Espèces de Trichoderma dans la Lutte Biologique Contre Phytophthora Palmivora, Agent de la Pourriture Brune des Cabosses du Cacaoyer en Côte d’Ivoire. European Journal of Scientific Research, 134(2), 158–172. http://hdl.handle.net/20.500.12708/151402 ( reposiTUm)

Bonazza, K., Gaderer, R., Neudl, S., Przylucka, A., Allmaier, G., Druzhinina, I. S., Grothe, H., Friedbacher, G., & Seidl-Seiboth, V. (2015). The fungal cerato-platanin protein EPL1 forms highly ordered layers at hydrophobic/hydrophilic interfaces. Soft Matter, 11(9), 1723–1732. https://doi.org/10.1039/c4sm02389g ( reposiTUm)

Karimi Aghcheh, R., Németh, Z., Atanasova, L., Fekete, E., Paholcsek, M., Sándor, E., Aquino, B., Druzhinina, I. S., Karaffa, L., & Kubicek, C. P. (2014). The VELVET A Orthologue VEL1 of Trichoderma reesei Regulates Fungal Development and Is Essential for Cellulase Gene Expression. PLoS ONE, 9(11), e112799. https://doi.org/10.1371/journal.pone.0112799 ( reposiTUm)

Hori, C., Ishida, T., Igarashi, K., Samejima, M., Suzuki, H., Master, E., Ferreira, P., Ruiz-Dueñas, F., Held, B., Canessa, P., Larrondo, L. F., Schmoll, M., Druzhinina, I., Kubicek, P. C., Gaskell, J. A., Kersten, P., St. John, F., Glasner, J., Sabat, G., & Cullen, D. (2014). Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood. PLoS Genetics, 10(12), Article 1004759. https://doi.org/10.1371/journal.pgen.1004759 ( reposiTUm)

Przylucka, A., Ribitsch, D., Herrero-Acero, E., Gübitz, G., Kubicek, C. P., & Druzhinina, I. (2014). Hydrophobins class I versus class II: Trichoderma virens HFB9a and HFB9b (class I) are more effective as enhancing agents in enzymatic PET hydrolysis and surface modulators compared to HFB4 and HFB7 (class II). New Biotechnology, 31, S190. https://doi.org/10.1016/j.nbt.2014.05.935 ( reposiTUm)

Pflieger, W. P., Atanasova, L., Karanyicz, E., Sipiczki, M., Bond, U., Druzhinina, I., Sterflinger, K., & Lopandic, K. (2014). Generation of New Genotypic and Phenotypic Features in Artificial and Natural Yeast Hybrids. Food Technology and Biotechnology, 52(1), 46–57. http://hdl.handle.net/20.500.12708/156706 ( reposiTUm)

Atanasova, L., Knox, B. P., Kubicek, C. P., Druzhinina, I., & Baker, S. E. (2013). The Polyketide Synthase Gene pks4 of Trichoderma reesei Provides Pigmentation and Stress Resistance. Eukaryotic Cell, 12(11), 1499–1508. http://hdl.handle.net/20.500.12708/155729 ( reposiTUm)

Erper, I., Turkkan, M., Atanasova, L., Druzhinina, I., Karaca, G., & Cebi-Kilicoglu, M. (2013). Integrated assessment of the mycoparasitic and phytostimulating properties of Trichoderma strains against Rhizoctonia solani. Bulgarian Journal of Agricultural Science, 19(4), 737–743. http://hdl.handle.net/20.500.12708/155752 ( reposiTUm)

Mulaw, T., Druzhinina, I., Kubicek, C., & Atanasova, L. (2013). Novel Endophytic Trichoderma spp. Isolated from Healthy Coffea arabica Roots are Capable of Controlling Coffee Tracheomycosis. Diversity, 5(4), 750–766. https://doi.org/10.3390/d5040750 ( reposiTUm)

Karaffa, L., Coulier, L., Fekete, E., Overkamp, K. M., Druzhinina, I. S., Mikus, M., Seiboth, B., Novák, L., Punt, P. J., & Kubicek, C. P. (2013). The intracellular galactoglycome in Trichoderma reesei during growth on lactose. Applied Microbiology and Biotechnology, 97(12), 5447–5456. https://doi.org/10.1007/s00253-012-4667-y ( reposiTUm)

Lehner, S., Atanasova, L., Neumann, N. K., Krska, R., Lemmens, M., Druzhinina, I., & Schuhmacher, R. (2013). Isotope-Assisted Screening for Iron-Containing Metabolites Reveals a High Degree of Diversity among Known and Unknown Siderophores Produced by Trichoderma spp. Applied and Environmental Microbiology, 79(1), 18–31. http://hdl.handle.net/20.500.12708/155173 ( reposiTUm)

López-Quintero, C. A., Atanasova, L., Franco-Molano, A. E., Gams, W., Komon-Zelazowska, M., Theelen, B., Müller, W. H., Boekhout, T., & Druzhinina, I. (2013). DNA barcoding survey of Trichoderma diversity in soil and litter of the Colombian lowland Amazonian rainforest reveals Trichoderma strigosellum sp. nov. and other species. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 104(5), 657–674. https://doi.org/10.1007/s10482-013-9975-4 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I. S., Fröhlich-Nowoisky, J., & Grothe, H. (2013). Spores of many common airborne fungi reveal no ice nucleation activity in oil immersion freezing experiments. Biogeosciences, 10(12), 8083–8091. https://doi.org/10.5194/bg-10-8083-2013 ( reposiTUm)

Atanasova, L., Crom, S. L., Gruber, S., Coulpier, F., Seidl-Seiboth, V., Kubicek, C. P., & Druzhinina, I. S. (2013). Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism. BMC Genomics, 14(121). https://doi.org/10.1186/1471-2164-14-121 ( reposiTUm)

Aghcheh, R. K., Druzhinina, I. S., & Kubicek, C. P. (2013). The Putative Protein Methyltransferase LAE1 of Trichoderma atroviride Is a Key Regulator of Asexual Development and Mycoparasitism. PLoS ONE, 8(6), e67144. https://doi.org/10.1371/journal.pone.0067144 ( reposiTUm)

Espino Tenorio de Rammer, L., Ribitsch, D., Przylucka, A., Marold, A., Greimel, K. J., Herrero-Acero, E., Gübitz, G., Kubicek, C. P., & Druzhinina, I. (2013). Two Novel Class II Hydrophobins from Trichoderma spp. Stimulate Ezymatic Hydrolysis of Poly(Ethylene Terephthalate) when Expressed as Fusion Proteins. Applied and Environmental Microbiology, 79(14), 4230–4238. http://hdl.handle.net/20.500.12708/155168 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I. S., & Grothe, H. (2013). Spores of most common airborne fungi reveal no ice nucleation activity. Biogeosciences Discussions, 10(6), 10125–10141. https://doi.org/10.5194/bgd-10-10125-2013 ( reposiTUm)

Druzhinina, I., Komon-Zelazowska, M., Ismaiel, A., Jaklitsch, W. M., Mullaw, T., Samuels, G. J., & Kubicek, C. P. (2012). Molecular phylogeny and species delimitation in the section Longibrachiatum of Trichoderma. Fungal Genetics and Biology, 49(5), 358–368. https://doi.org/10.1016/j.fgb.2012.02.004 ( reposiTUm)

Mukherjee, P. K., Buensanteai, N., Moran-Diez, M. E., Druzhinina, I. S., & Kenerley, C. M. (2012). Functional analysis of non-ribosomal peptide synthetases (NRPSs) in Trichoderma virens reveals a polyketide synthase (PKS)/NRPS hybrid enzyme involved in the induced systemic resistance response in maize. Microbiology, 158(1), 155–165. https://doi.org/10.1099/mic.0.052159-0 ( reposiTUm)

Druzhinina, I. S., Shelest, E., & Kubicek, C. P. (2012). Novel traits of Trichoderma predicted through the analysis of its secretome. FEMS Microbiology Letters, 337(1), 1–9. https://doi.org/10.1111/j.1574-6968.2012.02665.x ( reposiTUm)

Samuels, G. J., Ismaiel, A., Mulaw, T. B., Szakacs, G., Druzhinina, I. S., Kubicek, C. P., & Jaklitsch, W. M. (2012). The Longibrachiatum Clade of Trichoderma : a revision with new species. Fungal Diversity, 55(1), 77–108. https://doi.org/10.1007/s13225-012-0152-2 ( reposiTUm)

Degenkolb, T., Karimi Aghcheh, R., Dieckmann, R., Neuhof, T., Baker, S. E., Druzhinina, I., Kubicek, C. P., Brückner, H., & von Döhren, H. (2012). The Production of Multiple Small Peptaibol Families by Single 14-Module Peptide Synthetases in Trichoderma/Hypocrea. CHEMISTRY & BIODIVERSITY, 9(3), 499–535. http://hdl.handle.net/20.500.12708/163528 ( reposiTUm)

Friedl, M. A., & Druzhinina, I. S. (2012). Taxon-specific metagenomics of Trichoderma reveals a narrow community of opportunistic species that regulate each other ’s development. MICROBIOLOGY-SGM, 158(1), 69–83. https://doi.org/10.1099/mic.0.052555-0 ( reposiTUm)

Hawksworth, D. L., Crous, P. W., Redhead, S. A., Reynolds, D. R., Samson, R. A., Seifert, K. A., Taylor, J. W., Wingfield, M. J., Abaci, Ö., Aime, C., Asan, A., Bai, F.-Y., de Beer, Z. W., Begerow, D., Berikten, D., Boekhout, T., Buchanan, P. K., Burgess, T., Buzina, W., … Zhang, N. (2011). The Amsterdam Declaration on Fungal Nomenclature. IMA FUNGUS, 2(1), 105–111. https://doi.org/10.5598/imafungus.2011.02.01.14 ( reposiTUm)

Kubicek, C. P., Herrera-Estrella, A., Seidl-Seiboth, V., Martinez, D. A., Druzhinina, I., Thon, M., Zeilinger, S., Casas-Flores, S., Horwitz, B. A., Mukherjee, P. K., Mukherjee, M., Kredics, L., Alcaraz, L. D., Aerts, A., Antal, Z., Atanasova, L., Cervantes-Badillo, M. G., Challacombe, J., Chertkov, O., … Grigoriev, I. V. (2011). Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biology, 12, Article R40. https://doi.org/10.1186/gb-2011-12-4-r40 ( reposiTUm)

Druzhinina, I. S., Seidl-Seiboth, V., Herrera-Estrella, A., Horwitz, B. A., Kenerley, C. M., Monte, E., Mukherjee, P. K., Zeilinger, S., Grigoriev, I. V., & Kubicek, C. P. (2011). Trichoderma : the genomics of opportunistic success. Nature Reviews Microbiology, 9(10), 749–759. https://doi.org/10.1038/nrmicro2637 ( reposiTUm)

Portnoy, T., Margeot, A., Linke, R., Atanasova, L., Fekete, E., Sándor, E., Hartl, L., Karaffa, L., Druzhinina, I. S., Seiboth, B., Le Crom, S., & Kubicek, C. P. (2011). The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei : a master regulator of carbon assimilation. BMC Genomics, 12(269). https://doi.org/10.1186/1471-2164-12-269 ( reposiTUm)

Gal-Hemed, I., Atanasova, L., Komon-Zelazowska, M., Druzhinina, I., Viterbo, A., & Yarden, O. (2011). Marine Isolates of Trichoderma spp. as Potential Halotolerant Agents of Biological Control for Arid-Zone Agriculture. Applied and Environmental Microbiology, 77(15), 5100–5109. http://hdl.handle.net/20.500.12708/162806 ( reposiTUm)

Belayneh Mulaw, T., Kubicek, C., & Druzhinina, I. (2010). The Rhizosphere of Coffea Arabica in Its Native Highland Forests of Ethiopia Provides a Niche for a Distinguished Diversity of Trichoderma. Diversity, 2(4), 527–549. https://doi.org/10.3390/d2040527 ( reposiTUm)

Druzhinina, I. S., Kubicek, C. P., Komon-Zelazowska, M., Belayneh Mulaw, T., & Bissett, J. (2010). The Trichoderma harzianum demon : complex speciation history resulting in coexistence of hypothetical biological species, recent agamospecies and numerous relict lineages. BMC Evolutionary Biology, 10(1), 94. https://doi.org/10.1186/1471-2148-10-94 ( reposiTUm)

Druzhinina, I. S., Komoń-Zelazowska, M., Atanasova, L., Seidl, V., & Kubicek, C. P. (2010). Evolution and Ecophysiology of the Industrial Producer Hypocrea jecorina (Anamorph Trichoderma reesei) and a New Sympatric Agamospecies Related to It. PLoS ONE, 5(2), e9191. https://doi.org/10.1371/journal.pone.0009191 ( reposiTUm)

Atanasova, L., & Druzhinina, I. (2010). Global nutrient profiling by Phenotype MicroArrays : a tool complementing genomic and proteomic studies in conidial fungi. JOURNAL OF ZHEJIANG UNIVERSITY-SCIENCE B, 11(3), 151–168. http://hdl.handle.net/20.500.12708/168009 ( reposiTUm)

Zhang, C.-L., Wang, G.-P., Mao, L.-J., Komon-Zelazowska, M., Yuan, Z.-L., Lin, F.-C., Druzhinina, I. S., & Kubicek, C. P. (2010). Muscodor fengyangensis sp.nov. from southeast China : morphology, physiology and production of volatile compounds. Fungal Biology, 114(10), 797–808. https://doi.org/10.1016/j.funbio.2010.07.006 ( reposiTUm)

Atanasova, L., Jaklitsch, W. M., Komoń-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. S. (2010). Clonal Species Trichoderma parareesei sp. nov. Likely Resembles the Ancestor of the Cellulase Producer Hypocrea jecorina/T.reesei. Applied and Environmental Microbiology, 76(21), 7259–7267. https://doi.org/10.1128/aem.01184-10 ( reposiTUm)

Mikus, M., Hatvani, L., Neuhof, T., Komoń-Zelazowska, M., Dieckmann, R., Schwecke, T., Druzhinina, I. S., von Döhren, H., & Kubicek, C. P. (2009). Differential Regulation and Posttranslational Processing of the Class II Hydrophobin Genes from the Biocontrol Fungus Hypocrea atroviridis. Applied and Environmental Microbiology, 75(10), 3222–3229. https://doi.org/10.1128/aem.01764-08 ( reposiTUm)

Le Crom, S., Schackwitz, W., Pennacchio, L., Magnuson, J. K., Culley, D. E., Collett, J. R., Martin, J., Druzhinina, I. S., Mathis, H., Monot, F., Seiboth, B., Cherry, B., Rey, M., Berka, R., Kubicek, C. P., Baker, S. E., & Margeot, A. (2009). Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing. Proceedings of the National Academy of Sciences, 106(38), 16151–16156. https://doi.org/10.1073/pnas.0905848106 ( reposiTUm)

Migheli, Q., Balmas, V., Komoñ-Zelazowska, M., Scherm, B., Fiori, S., Kopchinskiy, A. G., Kubicek, C. P., & Druzhinina, I. S. (2009). Soils of a Mediterranean hot spot of biodiversity and endemism (Sardinia, Tyrrhenian Islands) are inhabited by pan-European, invasive species of Hypocrea/Trichoderma. Environmental Microbiology, 11(1), 35–46. https://doi.org/10.1111/j.1462-2920.2008.01736.x ( reposiTUm)

Zachow, C., Berg, C., Müller, H., Meincke, R., Komon-Zelazowska, M., Druzhinina, I. S., Kubicek, C. P., & Berg, G. (2009). Fungal diversity in the rhizosphere of endemic plant species of Tenerife (Canary Islands) : relationship to vegetation zones and environmental factors. The ISME Journal: Multidisciplinary Journal of Microbial Ecology, 3(1), 79–92. https://doi.org/10.1038/ismej.2008.87 ( reposiTUm)

Kemptner, J., Marchetti-Deschmann, M., Mach, R., Druzhinina, I. S., Kubicek, C. P., & Allmaier, G. (2009). Evaluation of matrix-assisted laser desorption/ionization (MALDI) preparation techniques for surface characterization of intact Fusarium spores by MALDI linear time-of-flight mass spectrometry. Rapid Communications in Mass Spectrometry, 23(6), 877–884. https://doi.org/10.1002/rcm.3949 ( reposiTUm)

Kredics, L., Kocsubé, S., Nagy, L., Komon-Zelazowska, M., Manczinger, L., Sajben, E., Nagy, A., Vágvölgyi, C., Kubicek, C. P., Druzhinina, I., & Hatvani, L. (2009). Molecular identification of Trichoderma species associated with Pleurotus ostreatus and natural substrates of the oyster mushroom. FEMS Microbiology Letters, 300(1), 58–67. https://doi.org/10.1111/j.1574-6968.2009.01765.x ( reposiTUm)

Druzhinina, I., Komon-Zelazowska, M., Kredics, L., Hatvani, L., Antal, Z., Belayneh, T., & Kubicek, C. P. (2008). Alternative reproductive strategies of Hypocrea orientalis and genetically close but clonal Trichoderma longibrachiatum, both capable of causing mycoses of humans. Microbiology, 154, 3447–3459. http://hdl.handle.net/20.500.12708/170940 ( reposiTUm)

Friedl, M., Schmoll, M., Kubicek, C. P., & Druzhinina, I. (2008). Photosimulation of Hypocrea atroviridis growth occurs due to a cross-talk of carbon metabolism, blue light receptors and response to oxidative stress. Microbiology, 154, 1229–1241. http://hdl.handle.net/20.500.12708/170922 ( reposiTUm)

Friedl, M., Kubicek, C. P., & Druzhinina, I. (2008). Carbon Source Dependence and Photosimulation of Conidiation in Hypocrea atroviridis. Applied and Environmental Microbiology, 74, 245–250. http://hdl.handle.net/20.500.12708/170923 ( reposiTUm)

Kubicek, C. P., Komon-Zelazowska, M., & Druzhinina, I. (2008). Fungal genus Hypocrea/Trichoderma : from barcodes to biodiversity. Journal of Zheijang University SCIENCE B - Biomedicine & Biotechnology, 9, 753–763. http://hdl.handle.net/20.500.12708/170927 ( reposiTUm)

Jaklitsch, W. M., Kubicek, C. P., & Druzhinina, I. (2008). Three European species of Hypocrea with reddish brown stromata and green ascospores. Mycologia, 100, 796–815. http://hdl.handle.net/20.500.12708/170935 ( reposiTUm)

Vàczy, K. Z., Sandor, E., Karaffa, L., Fekete, E., Fekete, E., Arnyasi, M., Czegledi, L., Kövics, G. J., Druzhinina, I., & Kubicek, C. P. (2008). Sexual Recombination in the Botrytis cinerea Populations in Hungarian Vineyards. Phytopathology, 98, 1312–1319. http://hdl.handle.net/20.500.12708/170934 ( reposiTUm)

Brunner, K., Omann, M., Pucher, M. E., Delic, M., Lehner, S. M., Domnanich, P., Kratochwill, K., Druzhinina, I., Denk, D., & Zeilinger, S. (2008). Trichoderma G protein-coupled receptors : functional characterisation of a cAMP receptor-like protein from Trichoderma atroviride. Current Genetics, 54(6), 283–299. https://doi.org/10.1007/s00294-008-0217-7 ( reposiTUm)

Kubicek, C. P., Baker, S. E., Gamauf, C., Kenerley, C., & Druzhinina, I. (2008). Purifying selection and birth-and-death evolution in the class II hydrophobin gene families of the ascomycete Trichoderma/Hypocrea. BMC Evolutionary Biology, 8, 1–16. http://hdl.handle.net/20.500.12708/170915 ( reposiTUm)

Seidl, V., Gamauf, C., Druzhinina, I., Seiboth, B., Hartl, L., & Kubicek, C. P. (2008). The Hypocrea jecorina (Trichoderma reesei) hypercellulolytic mutant RUT C30 lacks a 85 kb (29 gene-encoding) region of the wild-type genome. BMC Genomics, 9, 1–15. http://hdl.handle.net/20.500.12708/170924 ( reposiTUm)

Hatvani, L., Antal, Z., Manczinger, L., Szekeres, A., Druzhinina, I., Kubicek, C. P., Nagy, A., Nagy, E., Vágvölgyi, C., & Kredics, L. (2007). Green Mold Diseases of Agaricus and Pleurotus are Caused by Related but Phylogenetically Different Trichoderma Species. Journal of Phytopathology, 97, 532–537. http://hdl.handle.net/20.500.12708/169372 ( reposiTUm)

Zhang, C.-L., Liu, S.-P., Lin, F.-C., Kubicek, C. P., & Druzhinina, I. (2007). Trichoderma taxi sp. nov., an endophytic fungus from Chinese yew Taxus mairei, emphasizes the difficulties to phylogenetically align new species within Trichoderma/Hypocrea. FEMS Microbiology Letters, 270, 90–96. http://hdl.handle.net/20.500.12708/169373 ( reposiTUm)

Neuhof, T., Dieckmann, R., Druzhinina, I., Kubicek, C. P., Nakari - Seleta, T., Penttilä, M. E., & von Döhren, H. (2007). Direct identification of hydrophobins and their processing in Trichoderma using Intact-Cell MALDI-TOF mass spectrometry. The FEBS Journal, 274, 841–852. http://hdl.handle.net/20.500.12708/169375 ( reposiTUm)

Kubicek, C. P., Komon-Zelazowska, M., Sandor, E., & Druzhinina, I. (2007). Facts and challenges in the understanding of the biosynthesis of peptaibols by Trichoderma. Chemistry and Biodiversity, 4, 1068–1082. http://hdl.handle.net/20.500.12708/169376 ( reposiTUm)

Nagy, V., Seidl, V., Szakacs, G., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2007). Application of DNA BarCodes for screening of industrially important fungi: the haplotype of Trichoderma harzianum sensu stricto indicates superior chitinase formation. Applied and Environmental Microbiology, 73, 7048–7058. http://hdl.handle.net/20.500.12708/169382 ( reposiTUm)

Komon-Zelazowska, M., Bisset, J., Zafari, D., Hatvani, L., Manczinger, L., Woo, S. L., Lorito, M., Kredics, L., Kubicek, C. P., & Druzhinina, I. (2007). Genetically closely related but phenotypically divergent Trichoderma species cause world-wide green mould disease in oyster mushroom farms. Applied and Environmental Microbiology, 73, 7415–7426. http://hdl.handle.net/20.500.12708/169383 ( reposiTUm)

Neuhof, T., Dieckmann, R., Druzhinina, I., Kubicek, C. P., & von Döhren, H. (2007). Intact-Cell MALDI-TOF mass spectrometry analysis of peptaibol formation by the genus Trichoderma: can molecular phylogenic knowledge predict peptaibol structures ? Microbiology, 153, 3417–3437. http://hdl.handle.net/20.500.12708/169380 ( reposiTUm)

Schuster, A., Kubicek, C. P., Friedl, M. A., Druzhinina, I. S., & Schmoll, M. (2007). Impact of light on Hypocrea jecorina and the multiple cellular roles of ENVOY in this process. BMC Genomics, 8(449). https://doi.org/10.1186/1471-2164-8-449 ( reposiTUm)

Hatvani, L., Antal, Z., Manczinger, L., Druzhinina, I., Kubicek, C. P., Szekeres, A., Vágvölgyi, C., & Kredics, L. (2007). Worldwide Green Mold Disease of the Oyster Mushroom (Pleurotus ostreatus) is caused by Two New Species of Trichoderma, T.fulvidum and T. pleurotophilum. International Journal of Medicinal Mushrooms, 9(3 & amp;4), 241–242. http://hdl.handle.net/20.500.12708/169508 ( reposiTUm)

Hatvani, L., Kocsubè, L., Manczinger, L., Druzhinina, I., Kubicek, C. P., Vágvölgyi, C., & Kredics, L. (2007). A PCR-Based Test for the Rapid Detection of Trichoderma pleurotophilum and T. fulvidum, the Causative Agents of the Newly Emerged Worldwide Green Mold Disease of Pleurotus ostreatus. International Journal of Medicinal Mushrooms, 9(3 & amp; 4), 309–310. http://hdl.handle.net/20.500.12708/169509 ( reposiTUm)

Dela Cruz, T. E., Schulz, B., Kubicek, C. P., & Druzhinina, I. (2006). Carbon Source Utilization by the Marine Dendryphiella species D.arenaria D.salina. FEMS Microbiology Ecology, 59, 343–353. http://hdl.handle.net/20.500.12708/173227 ( reposiTUm)

Druzhinina, I., Schmoll, M., Seiboth, B., & Kubicek, C. P. (2006). Global Carbon Utilization Profiles of Wild Type, Mutant and Transformant Strains of Hypocrea jecorina. Applied and Environmental Microbiology, 72(3), 2126–2132. http://hdl.handle.net/20.500.12708/173230 ( reposiTUm)

Jaklitsch, W. M., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2006). Hypocrea crystalligena sp.nov., a common European species with a white-spored Trichoderma anamorph. Mycologia, 98(3), 499–513. http://hdl.handle.net/20.500.12708/173228 ( reposiTUm)

Druzhinina, I., Kopchinski, A., & Kubicek, C. P. (2006). The first 100 Trichoderma species is characterized by molecular data. Mycoscience, 47, 55–64. http://hdl.handle.net/20.500.12708/173229 ( reposiTUm)

Jaklitsch, W. M., Samuels, G. J., Dodd, S. L., Lu, B., & Druzhinina, I. (2006). Hypocrea rufa/ Trichoderma viride: a reassessment, and description of five closley related species with and without warted conidia. Studies in Mycology, 56, 135–177. http://hdl.handle.net/20.500.12708/173232 ( reposiTUm)

Samuels, G. J., Dodd, S. L., Lu, B., Petrini, O., Schroers, H., & Druzhinina, I. (2006). The Trichoderma koningii agregate species. Studies in Mycology, 56, 67–133. http://hdl.handle.net/20.500.12708/173231 ( reposiTUm)

Kopchinski, A., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2005). Trichoblast: A Multilocus Database for Trichoderma and Hypocrea Identifications. Mycological Research, 109(6), 658–660. http://hdl.handle.net/20.500.12708/173001 ( reposiTUm)

Zhang, C., Druzhinina, I., Kubicek, C. P., & Xu, T. (2005). Trichoderma biodiversity in China: Evidence for a North to South distribution of species in East Asia. FEMS Microbiology Letters, 251, 251–257. http://hdl.handle.net/20.500.12708/173000 ( reposiTUm)

Druzhinina, I., Kopchinski, A., Komon-Zelazowska, M., Bisset, J., Szakacs, G., & Kubicek, C. P. (2005). An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. Fungal Genetics and Biology, 42, 813–828. http://hdl.handle.net/20.500.12708/172999 ( reposiTUm)

Druzhinina, I., & Kubicek, C. P. (2005). Species concepts and biodiversity in Trichoderma and Hypocrea: from aggregate species clusters? Journal of Zhejiang University, 6B(2), 100–112. http://hdl.handle.net/20.500.12708/172998 ( reposiTUm)

Pang, G., Druzhinina, I., Sun, T., Zhu, H., & Zhang, J. (2020). Azaphilones biosynthesis in Trichoderma harzianum benefits fungal survival to oxidative stress. In Program & Abstracts (pp. 373–374). http://hdl.handle.net/20.500.12708/49588 ( reposiTUm)

Hochenegger, N., Vignolle, G. A., Mach, R. L., Druzhinina, I., Mach-Aigner, A. R., & Derntl, C. (2020). Bioprospecting a newly identified fungus from the Borneo rain forest regarding its bioactive properties. In Program & Abstracts (p. 222). http://hdl.handle.net/20.500.12708/49582 ( reposiTUm)

Cai, F., Gao, R., Zhao, Z., Ding, M., Akcapinar, G. B., & Druzhinina, I. (2020). lntracellular functions of hydrophobins and other surface-active proteins in Trichoderma. In Program & Abstracts (p. 214). http://hdl.handle.net/20.500.12708/50772 ( reposiTUm)

Cai, F., Gao, R., Zhao, Z., Ding, M., & Druzhinina, I. (2020). Never shall those born to crawl, learn to fly: Evolutionary compromises between spore hydrophobicity and fitness in Trichoderma. In Program & Abstracts (p. 123). http://hdl.handle.net/20.500.12708/50771 ( reposiTUm)

Gao, R., Cai, F., Ding, M., Jiang, S., Zhao, Z., & Druzhinina, I. (2020). Evolutionary odyssey of effector-like proteins in the mycoparasitic fungus Trichoderma. In Program & Abstracts (pp. 385–386). http://hdl.handle.net/20.500.12708/50778 ( reposiTUm)

Rahimi, M., Jiang, S., Grujic, M., Prusa, M., Gao, R., Abu Salim, K., Lim, L., Cai, F., & Druzhinina, I. (2020). Ecophysiology and applied biodiversity of phillosphere fungi in tropical and subtropical forests. In Program & Abstracts (pp. 415–416). http://hdl.handle.net/20.500.12708/50779 ( reposiTUm)

Chenthamara-Kariyankode, K., Cai, F., von Rotz, S., Cervenka, I., Shen, Q., & Druzhinina, I. (2019). The enrichment in hydrophobin-encoding genes constitutes the main genomic hallmark of Trichoderma: the pattern search revealed a plethora of unlmown genes absent in other hypocrealean fungi. In Abstract Book (p. 1). http://hdl.handle.net/20.500.12708/50424 ( reposiTUm)

Chenthamara-Kariyankode, K., Steindorff, A. S., Gojic, V., Shelest, E., Grigoriev, I., Kubicek, C. P., & Druzhinina, I. (2019). The comparative genemies of the most common Triehederma species reveals the unique pattern of the ankyrin domain-containing proteins in orphomes of individual Triehederma species. In Abstract Book (p. 1). http://hdl.handle.net/20.500.12708/50423 ( reposiTUm)

Cai, F., Gao, R., Zhao, Z., Ding, M., Chenthamara-Kariyankode, K., Akcapinar, G. B., Shen, Q., & Druzhinina, I. (2019). Hydrophobins constitute the major part of the massive extracellular matrix of the conidiating Trichoderma colony and influence its fitness by modulating spore dispersal and survival. In Abstract Book (p. 1). http://hdl.handle.net/20.500.12708/50422 ( reposiTUm)

Hochenegger, N., Mach, R. L., Druzhinina, I., Mach-Aigner, A. R., & Derntl, C. (2019). Bioprospecting of fungi from the Borneo rain forest regarding their bioactive properties. In 18. Österreichische Chemietage (p. 1). http://hdl.handle.net/20.500.12708/50425 ( reposiTUm)

Kamravamanesh, D., Kovacs, T., Druzhinina, I., Pflügl, S., Lackner, M., & Herwig, C. (2018). Photosynthetic Polyhydroxybutyrate Production in Cyanobacteria. In Book of Abstracts (p. 1). http://hdl.handle.net/20.500.12708/50334 ( reposiTUm)

Yemelyanova, T., Berezhinskiy, V., Przylucka, A., Cai, F., Akcapinar, G. B., Grothe, H., Reimhult, E., & Druzhinina, I. (2017). Hydrophobins as inactive excipients in the pharmaceutical and food industry. In Book of Abstracts (pp. 82–83). http://hdl.handle.net/20.500.12708/50012 ( reposiTUm)

Chenthamara-Kariyankode, K., Cai, F., Przylucka, A., Shen, Q., Akcapinar, G. B., & Druzhinina, I. (2017). The Origin and Architecture of Trichoderma Hydrophobome. In Book of Abstracts (pp. 90–91). http://hdl.handle.net/20.500.12708/50017 ( reposiTUm)

Lobanov, V., Przylucka, A., Akcapinar, G. B., Bonazza, K., Mello de Sousa, T. M., Mach-Aigner, A. R., Grothe, H., Reimhult, E., & Druzhinina, I. (2017). Production of Fungal Surface-Active Proteins in Three Microbial Cell Factories. In Book of Abstracts (p. 1). http://hdl.handle.net/20.500.12708/50020 ( reposiTUm)

Akcapinar, G. B., Camposeo, T., Berezhinskiy, V., Przylucka, A., Cai, F., Mello de Sousa, T. M., Grothe, H., Reimhult, E., Mach-Aigner, A. R., Shen, Q., & Druzhinina, I. (2017). Learning from fungi: new applications of the natural and engineered surfaceactive proteins from fungi. In Book of Abstracts (p. 1). http://hdl.handle.net/20.500.12708/50021 ( reposiTUm)

Rahimi, M., Grujic, M., Pleha, C., Forte, A., Chenthamara-Kariyankode, K., Pretzer, C., Kopchinskiy, A., Pourmehdi, S., Lim, L., Akcapinar, G. B., & Druzhinina, I. (2017). Degradation of synthetic polymers by epyphytic fungi from high canopy of the tropical rain forest. In Book of Abstracts (pp. 94–95). http://hdl.handle.net/20.500.12708/50856 ( reposiTUm)

Rahimi, M., Pretzer, C., Fischer, M., Kopchinskiy, A., Laciny, A., Grujic, M., Abu Salim, K., Lim, L., Chan, C. M., Parich, A., Schuhmacher, R., Zettel, H., & Druzhinina, I. (2017). Microbial Communities in the Nests of Borneo’s “Exploding Ants” Colobopsis cylindrica Complex. In Abstract Book (p. 1). http://hdl.handle.net/20.500.12708/50027 ( reposiTUm)

Akcapinar, G. B., Przylucka, A., Cai, F., Mello de Sousa, T. M., Grothe, H., Reimhult, E., Mach-Aigner, A. R., Shen, Q., & Druzhinina, I. (2017). Learning from nature: establishment of a library of natural and rationally designed hydrophobins from Trichoderma spp. with diverse surface activity. In Abstract Book (p. 64). http://hdl.handle.net/20.500.12708/48603 ( reposiTUm)

Druzhinina, I. (2017). Parasitism of Trichoderma on closely related fungi (adelphoparasitism) is linked to intensive interfungal DNA exchange. In Abstract Book (p. 108). http://hdl.handle.net/20.500.12708/50024 ( reposiTUm)

Druzhinina, I., Rahimi, M., Grujic, M., Forte, A., Pourmehdi, S., Pretzer, C., Kopchinskiy, A., Chenthamara-Kariyankode, K., Fischer, M., Laciny, A., Abu Salim, K., Lim, L., Chan, C. M., Parich, A., Schuhmacher, R., & Zettel, H. (2017). Ecophysiology of Fungi from the Habitats of Borneo’s “Exploding Ants.” In User Meeting Abstracts (pp. 36–37). http://hdl.handle.net/20.500.12708/50010 ( reposiTUm)

Chenthamara-Kariyankode, K., Cai, F., Przylucka, A., Shen, Q., Akcapinar, G. B., & Druzhinina, I. (2017). The Origin and Architecture of Trichoderma Hydrophobome. In User Meeting Abstracts (pp. 24–25). http://hdl.handle.net/20.500.12708/50009 ( reposiTUm)

Przylucka, A., Akcapinar, G. B., Bonazza, K., Mello de Sousa, T. M., Mach-Aigner, A. R., Reimhult, E., Grothe, H., Kubicek, C. P., & Druzhinina, I. (2017). Expression platforms impact the surface modulating properties of Trichoderma class II hydrophobins. In Abstract Book (p. 113). http://hdl.handle.net/20.500.12708/50025 ( reposiTUm)

Cai, F., Rahimi, M., Akcapinar, G. B., Yagtu, A. C., Przylucka, A., Pang, G., Shen, Q., & Druzhinina, I. (2017). Functional analysis of class II hydrophobin HFB4 in Trichoderma harzianum and its sibling species T. guizhouense. In Abstract Book (p. 123). http://hdl.handle.net/20.500.12708/50026 ( reposiTUm)

Lobanov, V., Cai, F., Przylucka, A., Sidarenka, L., Shen, Q., & Druzhinina, I. (2017). Production of Hydrophobins in the two expression systems based on Trichoderma. In Book of Abstracts (pp. 52–53). http://hdl.handle.net/20.500.12708/50016 ( reposiTUm)

Druzhinina, I. (2016). Benefits and potential pitfalls of Trichoderma use for plant protection as revealed from its ecological genomics. In Controle biologico de doencas de plantas (pp. 159–177). http://hdl.handle.net/20.500.12708/49454 ( reposiTUm)

Druzhinina, I., Atanasova, L., Chenthamara-Kariyankode, K., Grujic, M., Henrissat, B., Zhang, J., Shen, Q., Grigoriev, I., & Kubicek, C. P. (2016). Horizontal gene transfers drove the mycoparasite Trichoderma to adapt to saprotrophy and cellulase production. In Abstract Book (p. 70). http://hdl.handle.net/20.500.12708/49456 ( reposiTUm)

Atanasova, L., Dubey, M., Grujic, M., Gudmundsson, M., Druzhinina, I., Sandgren, M., Kubicek, C. P., Funck Jensen, D., & Karlsson, M. (2016). Functional characterization of Clonostachys rosea pectate lyase PEL1 in Trichoderma reesei. In Abstract Book (p. 264). http://hdl.handle.net/20.500.12708/49457 ( reposiTUm)

Zhang, J., Miao, Y., Atanasova, L., Yang, D., Rahimi, M., Druzhinina, I., & Shen, Q. (2016). The function of reactive oxygen species in the mycoparasitic attack of Trichoderma guizhouense on Fusarium oxysporum. In Abstract Book (p. 320). http://hdl.handle.net/20.500.12708/49459 ( reposiTUm)

Rahimi, M., & Druzhinina, I. (2016). Impact of natural associated bacteria on mycoparasitism of Trichoderma and it’s relevance for plant protection. In Abstract Book (p. 269). http://hdl.handle.net/20.500.12708/49458 ( reposiTUm)

Akcapinar, G. B., Przylucka, A., Cai, F., Mello de Sousa, T. M., Grothe, H., Reimhult, E., Mach-Aigner, A. R., Shen, Q., & Druzhinina, I. (2016). Rational design of novel Trichoderma hydrophobins for industrial applications. In Abstract Book (p. 424). http://hdl.handle.net/20.500.12708/49461 ( reposiTUm)

Cai, F., Akcapinar, G. B., Przylucka, A., Pang, G., Shen, Q., & Druzhinina, I. (2016). Hydrophobins of Trichoderma guizhouense inhibit tomato defence system for successful colonization of rhizosphere. In Abstract Book (p. 399). http://hdl.handle.net/20.500.12708/49460 ( reposiTUm)

Yang, D., Miao, Y., Kubicek, C. P., Grigoriev, I., Kopchinskiy, A., Zhang, J., Atanasova, L., Zhang, R., Shen, Q., & Druzhinina, I. (2016). trichoCODE : a modal genome annotation pipeline for Trichoderma. In Abstract Book (p. 470). http://hdl.handle.net/20.500.12708/49462 ( reposiTUm)

Kredics, L., Druzhinina, I., Vágvölgyi, C., & Hatvani, L. (2016). Old and emerging causal agents of mushroom green mould disease. In Book of Abstracts (p. 24). http://hdl.handle.net/20.500.12708/49479 ( reposiTUm)

Urban, P., Marik, T., Szekeres, A., Manczinger, L., Hatvani, L., Vágvölgyi, C., Druzhinina, I., Miao, Y., Fekete, C., & Kredics, L. (2016). Peptaibol Production ofthe Mushroom Green Mould Trichoderma pleuroti: from the Genomic Background to Compound Profiles. In Book of Abstracts (p. 38). http://hdl.handle.net/20.500.12708/49557 ( reposiTUm)

Kirschner, A. K. T., Pretzer, C., Amaro, C., Benediktsdottir, E., Heldenström, I., Hervio-Heath, D., Huhulescu, S., Schets, F., Farnleitner, A. H., & Druzhinina, I. (2016). High micro-diversity of Vibrio cholerae in the Central European lake Neusiedler See is associated with intensive genetic recombination in the reed habitat and the longdistance transfer of strains. In Abstracts (p. 79). http://hdl.handle.net/20.500.12708/49469 ( reposiTUm)

Urban, P., Miao, Y., Fekete, C., Hatvani, L., Büchner, R., Vágvölgyi, C., Druzhinina, I., & Kredics, L. (2016). Complete Genome Sequence of the Green Mould Pathogen Trichoderma pleuroti. In Book of Abstracts (pp. 51–52). http://hdl.handle.net/20.500.12708/49478 ( reposiTUm)

Büchner, R., Hatvani, L., Vágvölgyi, C., Manczinger, L., Druzhinina, I., & Kredics, L. (2016). Epidemiological Survey of a Trichoderma Green Mould Outbreak at a Hungarian Mushroom Farm. In Book of Abstracts (pp. 84–85). http://hdl.handle.net/20.500.12708/49477 ( reposiTUm)

Urban, P., Miao, Y., Fekete, C., Schönhardt, K., Valasek, A., Hatvani, L., Manczinger, L., Vágvölgyi, C., Druzhinina, I., & Kredics, L. (2016). Complete genome sequence of Trichoderma aggressivum f. europaeum, the causal agent of green mould disease in Agaricus cultivation. In Book of Abstracts (p. 62). http://hdl.handle.net/20.500.12708/49711 ( reposiTUm)

Kirschner, A. K. T., Pretzer, C., Huhulescu, S., Farnleitner, A. H., & Druzhinina, I. (2016). High micro-diversity of Vibrio cholerae in Iake Neusiedler See is associated with intensive genetic recombination in the reed habitat and the long-distance transfer of strains. In Abstracts (p. 64). http://hdl.handle.net/20.500.12708/49313 ( reposiTUm)

Fischer, M., Parich, A., Simader, A. M., Kopchinskiy, A., Zettel, H., Laciny, A., Pretzer, C., Rahimi, M., Abu Salim, K., Druzhinina, I., & Schuhmacher, R. (2016). Untargeted Metabolomics of Borneo’s “Exploding Ants.” In Book of Abstracts (p. 44). http://hdl.handle.net/20.500.12708/49467 ( reposiTUm)

Zhang, J., Akcapinar, G. B., Atanasova, L., Rahimi, M., Przylucka, A., Yang, D., Kubicek, C. P., Zhang, R., Shen, Q., & Druzhinina, I. (2015). The M35 neutral metallopeptidase NMP1 of Trichoderma guizhouense is required for predation on Fusarium oxysporum and is involved in biotrophic or antagonistic interactions with some other fungi. In Abstract Book (p. 181). http://hdl.handle.net/20.500.12708/48934 ( reposiTUm)

Druzhinina, I., Yang, D., Kubicek, C. P., Grigoriev, I., Kopchinskiy, A., Zhang, J., Atanasova, L., Zhang, R., & Shen, Q. (2015). trichoCODE: A Modal Genome Annotation Pipeline for Good Fungi from the Genus Trichoderma. In Abstracts (p. 37). http://hdl.handle.net/20.500.12708/48945 ( reposiTUm)

Atanasova, L., Chenthamara-Kariyankode, K., Grujic, M., Aerts, A., Kuo, A., Grigoriev, I., Kubicek, C. P., & Druzhinina, I. (2015). Evolution and diversification of Trichoderma CAZome based on the genome of eight species. In Abstracts Book. EMBO Conference 2015 - Exploring the genomic complexity and diversity of eukaryotes, Sant Feliu de Guixols, Spanien, EU. http://hdl.handle.net/20.500.12708/49148 ( reposiTUm)

Kirschner, A. K. T., Pretzer, C., Amaro, C., Benediktsdottir, E., Hedenström, I., Hervio-Heath, D., Huhulescu, S., Schets, C., Farnleitner, A. H., & Druzhinina, I. (2015). Assessment of Vibrio cholerae microdiversity in lake Neusiedler See, Austria - A pan-European perspective. In http://www.vibrionet.de/news/2015_workshop.html (p. 1). http://hdl.handle.net/20.500.12708/49154 ( reposiTUm)

Tamas, M., Szekeres, A., Atanasova, L., Druzhinina, I., Andersson, M. A., Salkinoja-Salonen, M., Leitgeb, B., Vágvölgyi, C., & Kredics, L. (2015). New bioactive trichobrachin-like peptaibols detected in natural forest habitatderived isolates from the Longibrachiatum section of the filamentous fungal genus Triehederma. In Proceedings of the 3#^{rd} Annual Meeting (p. 55). http://hdl.handle.net/20.500.12708/49152 ( reposiTUm)

Yang, D., Kubicek, C. P., Miao, Y., Grigoriev, I., Kopchinskiy, A., Zhang, J., Atanasova, L., Zhang, R., Shen, Q., & Druzhinina, I. (2015). trichoCODE: A modal genome annotation pipeline for Trichoderma. In Abstracts Book. EMBO Conference 2015 - Exploring the genomic complexity and diversity of eukaryotes, Sant Feliu de Guixols, Spanien, EU. http://hdl.handle.net/20.500.12708/49149 ( reposiTUm)

Akcapinar, G. B., Przylucka, A., Cai, F., Shen, Q., Kubicek, C. P., & Druzhinina, I. (2015). Modulation of surface properties of materials by engineered hydrophobins for effective biocatalysis. In Biotrans 2015 (p. 559). http://hdl.handle.net/20.500.12708/49150 ( reposiTUm)

Przylucka, A., Akcapinar, G. B., Boraca, M., Kubicek, C. P., & Druzhinina, I. (2015). Hydrophobins of Trichoderma as immobilizers of enzymes on polymeric surfaces for biocatalysis. In Biotrans 2015 (p. 525). http://hdl.handle.net/20.500.12708/49151 ( reposiTUm)

Zhang, J., Yang, D., Atanasova, L., Zhang, R., Kubicek, C. P., Druzhinina, I., & Shen, Q. (2014). Molecular mechanisms in hyperparasitism of T. guizhouense NJAU 4742 on Fusarium oxysporum f. sp. cubense 4 revealed through the whole genome-wide transcriptional response. In Book of Abstracts (p. 180). http://hdl.handle.net/20.500.12708/48582 ( reposiTUm)

Atanasova, L., Grandits, M., Kubicek, C. P., & Druzhinina, I. (2014). Sex modulates long distance dispersal and antagonistic potential of Trichoderma reesei. In Book of Abstracts (p. 289). http://hdl.handle.net/20.500.12708/48583 ( reposiTUm)

Chenthamara-Kariyankode, K., Atanasova, L., Yang, D., Zhang, J., Kopchinskiy, A., Grigoriev, I., Kubicek, C. P., Shen, Q., & Druzhinina, I. (2014). Phylogenomics of Trichoderma. In Book of Abstracts (p. 184). http://hdl.handle.net/20.500.12708/48581 ( reposiTUm)

Livoi, M., Uzbas, F., Przylucka, A., Atanasova, L., Kubicek, C. P., & Druzhinina, I. (2014). Ecophysiological Roles of the Two Novel Class II Hydrophobins (HFB4 and HFB7) from Trichoderma virens. In Book of Abstracts (p. 118). http://hdl.handle.net/20.500.12708/48580 ( reposiTUm)

Przylucka, A., Livoi, M., Espino Tenorio de Rammer, L., Gasser, B., Atanasova, L., Mattanovich, D., Kubicek, C. P., & Druzhinina, I. (2014). Recombinant production of class II hydrophobins from Trichoderma virens by three microbial cell factories. In Book of Abstracts (p. 311). http://hdl.handle.net/20.500.12708/48584 ( reposiTUm)

Karimi Aghcheh, R., Nemeth, Z., Atanasova, L., Ghassemi, S., Aquino, B., Druzhinina, I., Fekete, E., Seiboth, B., Karaffa, L., & Kubicek, C. P. (2014). Vel1 of Trichoderma reesei has an auxiliary role in in cellulase gene expression and is required for sexual and asexual development. In Book of Abstracts (p. 152). http://hdl.handle.net/20.500.12708/48508 ( reposiTUm)

Kirschner, A. K. T., Pretzer, C., Farnleitner, A. H., & Druzhinina, I. (2014). Assessment of environmental Vibrio cholerae microdiversity via multilocus-sequence analysis. In www.efdelegates.ed.ac.uk (p. 1). http://hdl.handle.net/20.500.12708/48851 ( reposiTUm)

Atanasova, L., Yang, D., Zhang, J., Kopchinskiy, A., Baker, S. E., Grigoriev, I., Kubicek, C. P., & Druzhinina, I. (2014). Genomic portrayal of opportunistic Trichoderma species. In Biology of pathogenic fungi (p. 18). http://hdl.handle.net/20.500.12708/48824 ( reposiTUm)

Druzhinina, I. (2014). Genomic boundaries of Trichoderma opportunism. In TG2014 Programme & Abstracts (p. 21). http://hdl.handle.net/20.500.12708/48825 ( reposiTUm)

Karaffa, L., Coulier, L., Fekete, E., Overkamp, K. M., Druzhinina, I., Mikus, M., Seiboth, B., Novak, L., Punt, P. J., & Kubicek, C. P. (2013). Analysis of the intracellular galactoglycom of Trichoderma reesei grown on lactose. In 27#^{th} Fungal Genetics Conference (p. 78). http://hdl.handle.net/20.500.12708/48174 ( reposiTUm)

Atanasova, L., Chenthamara-Kariyankode, K., Kopchinskiy, A., Baker, S. E., Grigoriev, I., Pomraning, K. R., Freitag, M., Kubicek, C. P., & Druzhinina, I. (2013). A unique genomic architecture of Trichoderma species from Section Longibrachiatum. In Comparative Genomics of Eukaryotic Microorganisms: Complexity Patterns in Eukaryotic Genomes (pp. 83–84). http://hdl.handle.net/20.500.12708/48342 ( reposiTUm)

Chenthamara-Kariyankode, K., Atanasova, L., Zhang, J., Kopchinskiy, A., LaButti, K., Kuo, A., Grigoriev, I., Kubicek, C. P., Shen, Q., & Druzhinina, I. (2013). Phylogenomics of Trichoderma. In Comparative Genomics of Eukaryotic Microorganisms: Complexity Patterns in Eukaryotic Genomes (pp. 90–91). http://hdl.handle.net/20.500.12708/48341 ( reposiTUm)

Druzhinina, I., Kopchinskiy, A., & Kubicek, C. P. (2013). Comparative genomics of Trichoderma: a clue how to become an opportunist. In Comparative Genomics of Eukaryotic Microorganisms: Complexity Patterns in Eukaryotic Genomes (pp. 31–32). http://hdl.handle.net/20.500.12708/48343 ( reposiTUm)

Druzhinina, I., Karimi Aghcheh, R., Atanasova, L., & Kubicek, C. P. (2013). Developmental regulation and cellulase gene expression in Trichoderma reesei. In 27#^{th} Fungal Genetics Conference (p. 61). http://hdl.handle.net/20.500.12708/48221 ( reposiTUm)

Atanasova, L., Knox, B. P., Kubicek, C. P., Baker, S. E., & Druzhinina, I. (2013). The Trichoderma reesei polyketide synthase gene pks1 is necessary for yellow-green pigmentation of conidia an is involved in the establishment of environmental fitness. In 27#^{th} Fungal Genetics Conference (p. 59). http://hdl.handle.net/20.500.12708/48220 ( reposiTUm)

Zhang, J., Zhang, R., Druzhinina, I., & Shen, Q. (2013). Mechanistic investigation of Trichoderma cf. harzianum SQR-TO37 mycoparasitism against Fusarium oxysporum f.sp. cubense 4 (banana wilt disease). In 27#^{th} Fungal Genetics Conference (p. 258). http://hdl.handle.net/20.500.12708/48219 ( reposiTUm)

Atanasova, L., Davidson, D. W., Kamariah, A. S., & Druzhinina, I. (2013). Diversity and physiology of Trichoderma associated with Burholderia spp. in the nests of Borneo’s exploding ants. In BAGECO 12 - Bacterial Genetics and Ecology (pp. 89–90). http://hdl.handle.net/20.500.12708/48218 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I., Müller, C., Schmitt-Kopplin, P., Whitmore, K., & Grothe, H. (2013). Stress treatment of pollen and fungal spores - what are the impacts on IN activity? In Workshop - Atmospheric Ice Nucleation - Book of Abstracts. ESF-Workshop - Atmospheric Ice Nucleation, Wien, Austria. http://hdl.handle.net/20.500.12708/48128 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Chazallon, B., Druzhinina, I., & Grothe, H. (2013). Ice nucleation of bioaerosols - a resumee. In Geophysical Research Abstracts. EGU General Assembly 2013, Vienna, Austria. http://hdl.handle.net/20.500.12708/48129 ( reposiTUm)

Espino Tenorio de Rammer, L., Komon-Zelazowska, M., Ribitsch, D., Greimel, K. J., Herrero-Acero, E., Gübitz, G., Kubicek, C. P., & Druzhinina, I. (2012). The HFB4 family : novel class II hydrophobins of Trichoderma with universal infrageneric distribution and potential for industrial applications. In Meeting Abstracts (p. 254). http://hdl.handle.net/20.500.12708/47860 ( reposiTUm)

Atanasova, L., Le Crom, S., Gruber, S. G., Coulpier, F., Seidl-Seiboth, V., Druzhinina, I., & Kubicek, C. P. (2012). Functional diversity of Trichoderma mycoparasitism. In Meeting Abstracts (p. 129). http://hdl.handle.net/20.500.12708/47858 ( reposiTUm)

Marzouk, M. A., Ali, M. . I. A., Yasser, M. M., Mousa, A. S., & Druzhinina, I. (2012). Antifungal potential and ecophysiological characterization of indigenous Trichoderma spp. isolated from Nile Valley (Egypt). In Meeting Abstracts (p. 173). http://hdl.handle.net/20.500.12708/47857 ( reposiTUm)

Przylucka, A., Espino Tenorio de Rammer, L., Kubicek, C. P., & Druzhinina, I. (2012). A novel group of class II hydrophobins from Trichoderma with biased occurrence. In Meeting Abstracts (p. 254). http://hdl.handle.net/20.500.12708/47859 ( reposiTUm)

Druzhinina, I. (2012). Ecological Genomics of the Opportunistic Fungus Trichoderma. In Seventh Annual DOE Joint Genome Institute User Meeting (p. 27). http://hdl.handle.net/20.500.12708/47861 ( reposiTUm)

Karimi Aghcheh, R., Druzhinina, I., Atanasova, L., & Kubicek, C. P. (2012). Conidiation is the major target of LAE1 function in Trichoderma atroviride. In Meeting Abstracts (p. 94). http://hdl.handle.net/20.500.12708/47856 ( reposiTUm)

Lehner, S., Neumann, N. K., Atanasova, L., Krska, R., Lemmens, M., Druzhinina, I., & Schuhmacher, R. (2012). Targeted screening and structure characterization of iron-containing metabolites (siderophores) from Trichoderma spp., A. alternata and A. niger using LC-HR-MS/MS on an LTQ Orbitrap XL. In Biocontrol of plant pathogens in sustainable agriculture (p. 55). http://hdl.handle.net/20.500.12708/47862 ( reposiTUm)

Komon-Zelazowska, M., Kopchinskiy, A., Kubicek, C. P., & Druzhinina, I. (2011). Genus-wide screening for class II hydrophobins in Hypocrea/Trichoderma using phylogenetic and metagenomic approaches. In Abstracts (pp. 302–303). http://hdl.handle.net/20.500.12708/47563 ( reposiTUm)

Atanasova, L., Le Crom, S., Gruber, S. G., Coulpier, F., Seidl, V., Druzhinina, I., & Kubicek, C. P. (2011). The transcriptional profile of Trichoderma mycoparasitism. In Conference Series (p. 102). http://hdl.handle.net/20.500.12708/47560 ( reposiTUm)

Marzouk, M. A., Ali, M. . I. A., Yasser, M. M., Mousa, A. S., Kubicek, C. P., & Druzhinina, I. (2011). Molecular ecology of Trichoderma in Nile river basin and surrounding ecosystems in Egypt. In Abstracts (pp. 254–255). http://hdl.handle.net/20.500.12708/47562 ( reposiTUm)

Druzhinina, I. (2011). Molecular ecology of mycoparasitic fungus Hypocrea/Trichoderma. In Abstracts (pp. 142–143). http://hdl.handle.net/20.500.12708/47559 ( reposiTUm)

Druzhinina, I. (2011). Ecological genomics for domestication of Trichoderma. In Conference Series (p. 115). http://hdl.handle.net/20.500.12708/47561 ( reposiTUm)

Atanasova, L., Friedl, M., Bauer, H., Puxbaum, H., Kubicek, C. P., & Druzhinina, I. (2010). Metagenomic study of air borne diversity of mycoparasitic fungus Trichoderma (anamorph Hypocrea). In Biospektrum (p. 38). http://hdl.handle.net/20.500.12708/47067 ( reposiTUm)

Atanasova, L., Jaklitsch, W. M., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2010). A new cellulase producing species Trichoderma parareesei nom. prov. reveals high antagonistic potential against soil and plant pathogenic fungi. In IOBC/WPRS Working Group (p. 82). http://hdl.handle.net/20.500.12708/47066 ( reposiTUm)

Gal-Hemed, I., Atanasova, L., Komon-Zelazowska, M., Druzhinina, I., Kubicek, C. P., Viterbo, A., & Yarden, O. (2010). Characterization of Trichoderma isolates of marine origin and assessment of their potential as biocontrol agents. In IOBC/WPRS Working Group (p. 76). http://hdl.handle.net/20.500.12708/46953 ( reposiTUm)

Atanasova, L., Davidson, D. W., Kamariah, A. S., Anderson, N. F., & Druzhinina, I. (2010). Diversity and physiology of Trichoderma associated with nests of Borneo’s exploding ants. In IMC9 The Biology of Fungi. 9#^{th} International Mycological Congress, Edinburgh, UK, EU. http://hdl.handle.net/20.500.12708/47030 ( reposiTUm)

Atanasova, L., & Druzhinina, I. (2010). Trichoderma in Its Environment : Ecophysiological Aspects, Aerial Transfer and in Situ DNA Barcoding of Infrageneric Communities. In IMC9 The Biology of Fungi. 9#^{th} International Mycological Congress, Edinburgh, UK, EU. http://hdl.handle.net/20.500.12708/47029 ( reposiTUm)

Marchetti-Deschmann, M., Winkler, W., Kemptner, J., Raptakis, E., Druzhinina, I., Mach, R. L., Kubicek, C. P., & Allmaier, G. (2009). Classification of mycotoxin-producing Fusarium species based on MALDI-TOF MS analyses of their intact spores. In Proceedings of the 57th ASMS conference on mass spectrometry and allied topics (p. 3). http://hdl.handle.net/20.500.12708/46702 ( reposiTUm)

Le Crom, S., Schackwitz, W., Pennacchio, L., Magnuson, J., Culley, D., Collett, J., Martin, J., Druzhinina, I., Mathis, H., Monot, F., Seiboth, B., Cherry, B., Rey, M., Berka, R. M., Kubicek, C. P., Baker, S. E., & Margeot, A. (2009). Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing. In Eurofung Meeting (p. 24). http://hdl.handle.net/20.500.12708/46693 ( reposiTUm)

Kredics, L., Hatvani, L., Kocsubè, L., Komon-Zelazowska, M., Manczinger, L., Szekeres, A., Vágvölgyi, C., Kubicek, C. P., & Druzhinina, I. (2007). Cells as Producers of Food and Drinks Green Mold diseases of cultivated Mushrooms: Global Developments and the Situation in Hungary. In Power of microbes in industry and environment (p. 40). http://hdl.handle.net/20.500.12708/45941 ( reposiTUm)

Schuster, A., Kubicek, C. P., Friedl, M., Druzhinina, I., & Schmoll, M. (2007). Novel functions of the light response regulatory protein Envoy in Hypocrea jecorina. In Molecular Biology of Fungi (p. 128). http://hdl.handle.net/20.500.12708/45949 ( reposiTUm)

Hatvani, L., Kocsubè, L., Antal, Z., Szekeres, A., Druzhinina, I., Kubicek, C. P., Vágvölgyi, C., & Kredics, L. (2007). Pleurotus green mould disease: A PCR -based test for the rapid detection of the causative agents, Trichoderma pleurotophilum and Trichoderma fulvidum. In Acta Microbiologica et Immunologica Hungarica (pp. 45–46). http://hdl.handle.net/20.500.12708/45938 ( reposiTUm)

Kredics, L., Antal, Z., Szekeres, A., Hatvani, L., Komon-Zelazowska, M., Manczinger, L., Vágvölgyi, C., Nagy, E., Kubicek, C. P., & Druzhinina, I. (2006). Taxonomical aspects of Trichoderma as an opportunistic human patogen. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45718 ( reposiTUm)

Schmoll, M., Friedl, M., Do Nascimento Silva, R., Dorrer, M., & Kubicek, P. C. (2006). Stages and impact of crosstalk between light response and cellulase signal transduction in Hypocrea jecorina (Trichoderma reesei). In I. Druzhinina, A. Kopchinskiy, & P. C. Kubicek (Eds.), 8th European Conference on Fungal Genetics - Book of Abstracts (p. 138). http://hdl.handle.net/20.500.12708/45448 ( reposiTUm)

Dela Cruz, T. E., Schulz, B., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2006). DNA sequence analysis and metabolic profiles demonstrate existence of two marine Dendryphiella species that do not belong to the genus Scolecobasidium. In Book of Abstracts (p. 418). http://hdl.handle.net/20.500.12708/45447 ( reposiTUm)

Seidl, V., & Druzhinina, I. (2006). A screening system for carbon sources enhancing β-N-acetylglucosaminidase formation in Hypocrea atroviridis (Trichoderma atroviride). In Book of Abstracts (p. 202). http://hdl.handle.net/20.500.12708/45451 ( reposiTUm)

Komon-Zelazowska, M., Bisset, J., Zafari, D., Hatvani, L., Woo, S. L., Manczinger, L., Lorito, M., Kredics, L., Kubicek, C. P., & Druzhinina, I. (2006). A recently emerging green mold disease in Eurasian oyster mushroom farms is caused by new species of Trichoderma. In Proc.8#^{th} International Mycological Congress (p. 37). http://hdl.handle.net/20.500.12708/45636 ( reposiTUm)

Kopchinski, A., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2006). TrichoMASTER: integrated multiloci database for Hypocrea/Trichoderma species identification powered by sequence diagnosis, oligonucleotide barcode and similarity search tools. In Proc.8#^{th} International Mycological Congress (p. 38). http://hdl.handle.net/20.500.12708/45637 ( reposiTUm)

Friedl, M., Schmoll, M., Kubicek, C. P., & Druzhinina, I. (2006). Light stimulation of growth and conidiation in Hypocrea atroviridis is carbon source dependent. In I. Druzhinina, A. Kopchinskiy, & P. C. Kubicek (Eds.), 8th European Conference on Fungal Genetics - Book of Abstracts (p. 167). Manz Crossmedia. http://hdl.handle.net/20.500.12708/45633 ( reposiTUm)

Dela Cruz, T. E., Schulz, B., Komon-Zelazowska, M., & Druzhinina, I. (2006). Conidial morphology: homology or homoplasy? The analysis of molecular data shows that marine Dendryphiella species do not belong to the genus Scolecobasidium. In Proc. of 8#^{th} International Mycological Congress (p. 17). http://hdl.handle.net/20.500.12708/45634 ( reposiTUm)

Druzhinina, I., La Fe, K., Komon-Zelazowska, M., Ammirati, J., Kubicek, C. P., & Rogers, J. D. (2006). An unknown species from Hypocreaceae isolated from human lungs. In Proc. of 106#^{th} General Meeting of American Society for Microbiology. 106#^{th} General Meeting of American Society for Microbiology, Orlando, Florida, USA, Non-EU. http://hdl.handle.net/20.500.12708/45635 ( reposiTUm)

Jaklitsch, W. M., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2006). Hypocrea crystalligena sp. nov. and H. voglmayrii sp. nov. from Europe represent two new clades in Hypocrea/Trichoderma phylogeny. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45639 ( reposiTUm)

Friedl, M., Schmoll, M., Kubicek, C. P., & Druzhinina, I. (2006). Carbon source depending interaction of cAMP signalling pathway and light in Hypocrea atroviridis. In 8th International Mycological Congress: Congress Handbook & Abstracts (p. 124). IMC8 Organising Committee. http://hdl.handle.net/20.500.12708/45638 ( reposiTUm)

Druzhinina, I. (2006). An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. In Proc. of COST 853 (p. 10). http://hdl.handle.net/20.500.12708/45632 ( reposiTUm)

Druzhinina, I., La Fe, K., Komon-Zelazowska, M., Rogers, J. D., & Kubicek, C. P. (2006). An unkwown species of Hyporeaceae isolated from lung tissue of a patient with pulmonary fibrosis. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45653 ( reposiTUm)

Balmas, V., Scherm, B., Caria, R., Komon-Zelazowska, M., Druzhinina, I., Kubicek, C. P., & Migheli, Q. (2006). Species Pattern, Genetic Diversity and Biocontrol Potential of Trichoderma in Sardinia. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45629 ( reposiTUm)

Druzhinina, I., Kopchinski, A., Komon-Zelazowska, M., & Kubicek, C. P. (2006). An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. In Proceedings of the 8#^{th} International Mycological Congress (p. 150). http://hdl.handle.net/20.500.12708/45623 ( reposiTUm)

Belayneh, T., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2006). Indigenous Hypocrea/Trichoderma species as efficient agents for control of coffee wilt disease in Ethiopia. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45630 ( reposiTUm)

Dela Cruz, T. E., Druzhinina, I., Kubicek, C. P., & Schulz, B. (2006). Metabolic profiles support species concept of two marine Dendryphiella species D. arenaria and D. salina. In Proc. of 8#^{th} International Mycological Congress (p. 343). http://hdl.handle.net/20.500.12708/45631 ( reposiTUm)

Vàczy, K. Z., Druzhinina, I., Kubicek, C. P., Karaffa, L., Gàl, L., Kövics, G. J., & Sandor, E. (2006). Analysis of Botrytis cinera populations in the Eger and Tokaj wine regions - a multiloci approach. In Book of Abstracts (p. 413). http://hdl.handle.net/20.500.12708/45457 ( reposiTUm)

Seidl, V., Huemer, B., Seiboth, B., Druzhinina, I., & Kubicek, C. P. (2005). Characterization of the chitinolytic system ot Trichoderma: development of a novel screening method to monitor gene expression on multiple carbon sources. In Fungal Genetics Asilomar 2005 (p. 106). http://hdl.handle.net/20.500.12708/45128 ( reposiTUm)

Dela Cruz, T. E., Schulz, B., Kubicek, C. P., & Druzhinina, I. (2005). Metabolic and genetic diversity of marine Dendryphiella species from different geographical locations. In Exploitation of Fungi (p. 50). http://hdl.handle.net/20.500.12708/45340 ( reposiTUm)

Druzhinina, I., & Szakacs, G. (2005). Increased Extracellular Chitinase Production in Solid Substrate Fermentation by Trichoderma Harzianum Haplotype AA. In Acta Microbiologica et Immunologica (p. 107). http://hdl.handle.net/20.500.12708/45335 ( reposiTUm)

Sandor, E., Vàczy, K. Z., Druzhinina, I., Kubicek, C. P., & Karaffa, L. (2005). Genetic Characterization of Grape-Infecting, Botrytis Cinerea Populations from the Eger Wine Region, Hungary. In Acta Microbiologica et Immunologica (p. 135). http://hdl.handle.net/20.500.12708/45336 ( reposiTUm)

Chen, P., Pang, G., Cai, F., & Druzhinina, I. (2021). Strain Improvement and Genetic Engineering of Trichoderma f or Industrial Applications. In O. Zaragoza & A. Casadevall (Eds.), Encyclopedia of Mycology (pp. 505–517). Elsevier Inc. http://hdl.handle.net/20.500.12708/30254 ( reposiTUm)

Cai, F., Kubicek, C. P., & Druzhinina, I. S. (2021). Genetic Transformation of Trichoderma spp. In Biofuels and Biodiesel (pp. 171–185). Springer Nature Switzerland AG 2021. https://doi.org/10.1007/978-1-0716-1323-8_12 ( reposiTUm)

Chenthamara, K., Druzhinina, I. S., Rahimi, M. J., Grujic, M., & Cai, F. (2020). Ecological Genomics and Evolution of Trichoderma reesei. In A. R. Mach-Aigner & R. Martzy (Eds.), Trichoderma reesei (pp. 1–21). Springer Science + Business Media. https://doi.org/10.1007/978-1-0716-1048-0_1 ( reposiTUm)

Rahimi, M. J., Cai, F., Grujic, M., Chenthamara, K., & Druzhinina, I. S. (2020). Molecular Identification of Trichoderma reesei. In A. R. Mach-Aigner & R. Martzy (Eds.), Trichoderma reesei (pp. 157–175). Springer Science + Business Media. https://doi.org/10.1007/978-1-0716-1048-0_14 ( reposiTUm)

Hinterdobler, W., Beier, S., Kindel, S., & Schmoll, M. (2020). Sexual development, its determinants, and regulation in Trichoderma reesei. In V. K. Gupta, S. Zeilinger, H. B. Singh, & I. Druzhinina (Eds.), New and Future Developments in Microbial Biotechnology and Bioengineering (pp. 185–206). Elsevier B.V. https://doi.org/10.1016/b978-0-12-819453-9.00009-x ( reposiTUm)

Zeilinger, S., & Atanasova, L. (2020). Sensing and regulation of mycoparasitism-relevant processes in Trichoderma. In V. K. Gupta, S. Zeilinger, H. B. Singh, & I. Druzhinina (Eds.), New and Future Developments in Microbial Biotechnology and Bioengineering (pp. 39–55). Elsevier B.V. https://doi.org/10.1016/b978-0-12-819453-9.00002-7 ( reposiTUm)

Marik, T., Szekeres, A., Andersson, M. A., Salkinoja-Salonen, M., Tyagi, C., Leitgeb, B., Vágvölgyi, C., Druzhinina, I. S., & Kredics, L. (2017). Bioactive Peptaibols of Forest-Derived Trichoderma Isolates from Section Longibrachiatum. In M. Lukac, P. Grenni, & M. Gamboni (Eds.), Soil Biological Communities and Ecosystem Resilience (pp. 277–290). Springer International Publishing. https://doi.org/10.1007/978-3-319-63336-7_17 ( reposiTUm)

Druzhinina, I., & Kubicek, P. C. (2016). Volume Preface. In I. Druzhinina & C. P. Kubicek (Eds.), Environmental and Microbial Relationships (pp. 11–13). Springer International Publishing Switzerland 2016. https://doi.org/10.1007/978-3-319-29532-9 ( reposiTUm)

Chenthamara Kariyankode, K., & Druzhinina, I. (2016). Ecological Genomics of Mycotrophic Fungi. In I. Druzhinina & C. P. Kubicek (Eds.), Environmental and Microbial Relationships (pp. 215–246). Springer International Publishing Switzerland 2016. https://doi.org/10.1007/978-3-319-29532-9_12 ( reposiTUm)

Druzhinina, I. S., & Kubicek, C. P. (2016). Familiar Stranger: Ecological Genomics of the Model Saprotroph and Industrial Enzyme Producer Trichoderma reesei Breaks the Stereotypes. In sima Sariaslani & G. M. Gadd (Eds.), Advances in Applied Microbiology. Volume 95 (Vol. 95, pp. 69–147). Elsevier Inc. https://doi.org/10.1016/bs.aambs.2016.02.001 ( reposiTUm)

Ramoni, J., & Seiboth, B. (2016). 6 Degradation of Plant Cell Wall Polymers by Fungi. In I. Druzhinina & P. C. Kubicek (Eds.), Environmental and Microbial Relationships (Vol. 4, pp. 127–148). Springer International Publishing Switzerland 2016. https://doi.org/10.1007/978-3-319-29532-9_6 ( reposiTUm)

Kubicek, C. P., & Druzhinina, I. (2015). Trichoderma Mycoses and Mycotoxins. In R. R. M. Paterson & N. Lima (Eds.), Molecular Biology of Food and Water Borne Mycotoxigenic and Mycotic Fungi (pp. 521–538). CRC Press. http://hdl.handle.net/20.500.12708/28714 ( reposiTUm)

Bischof, R., & Seiboth, B. (2014). Molecular Tools for Strain Improvement of Trichoderma spp. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 179–191). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00012-6 ( reposiTUm)

Kredics, L., Hatvani, L., Naeimi, S., Körmöczi, P., Manczinger, L., Vágvölgyi, C., & Druzhinina, I. (2014). Biodiversity of the Genus Hypocrea/Trichoderma in Different Habitats. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 3–24). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00001-1 ( reposiTUm)

Hatvani, L., Vágvölgyi, C., Kredics, L., & Druzhinina, I. (2014). DNA Barcode for Species Identification in Trichoderma. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 41–55). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00003-5 ( reposiTUm)

Kubicek, C. P. (2014). Foreword. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (p. xiii). Elsevier B.V. http://hdl.handle.net/20.500.12708/28297 ( reposiTUm)

Seidl-Seiboth, V., Ihrmark, K., Druzhinina, I., & Karlsson, M. (2014). Molecular Evolution of Trichoderma Chitinases. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 67–78). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00005-9 ( reposiTUm)

Reithner, B., & Mach, R. L. (2014). Genes from Trichoderma as a Source for Improving Plant Resistance to Fungal Pathogen. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 505–513). Elsevier B.V. http://hdl.handle.net/20.500.12708/28574 ( reposiTUm)

Zeilinger, S., & Gruber, S. (2014). Insights into Signaling Pathways of Antagonistic Trichoderma Species. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 465–476). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00034-5 ( reposiTUm)

Atanasova, L. (2014). Ecophysiology of Trichoderma in Genomic Perspective. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 25–40). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00002-3 ( reposiTUm)

Derntl, C., Mach-Aigner, A. R., & Mach, R. L. (2014). Trichoderma Proteins with Disruption Activity on Cellulosic Substrates. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 309–317). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00021-7 ( reposiTUm)

Schmoll, M., Seiboth, B., Druzhinina, I., & Kubicek, C. P. (2014). Genomics Analysis of Biocontrol Species and Iudustrial Enzyme Producers from the Genus Trichoderma. In Fungal Genomics, The Mycota, Vol. XIII (pp. 233–264). Springer-Verlag. http://hdl.handle.net/20.500.12708/28284 ( reposiTUm)

Atanasova, L., Druzhinina, I., & Jaklitsch, W. M. (2013). Two Hundred Trichoderma Species Recognized on the Basis of Molecular Phylogeny. In P. Mukherjee, B. A. Horwitz, U. S. Singh, M. Mukherjee, & M. Schmoll (Eds.), Trichoderma Biology and Applications (pp. 10–42). CABI. http://hdl.handle.net/20.500.12708/28234 ( reposiTUm)

Druzhinina, I., & Kubicek, C. P. (2013). Ecological Genomics of Trichoderma. In The Ecological Genomics of Fungi (pp. 89–116). Wiley - Blackwell. http://hdl.handle.net/20.500.12708/28181 ( reposiTUm)

Druzhinina, I., & Kopchinski, A. (2006). TrichOKEY v.2 - a DNA oligonucliotide BarCode program for the identification of multiple seqences of Hypocrea and Trichoderma. In IMC8 2006 Cairns (pp. 53–59). Medimond - Monduzzi Editore International. http://hdl.handle.net/20.500.12708/25309 ( reposiTUm)

Gupta, V. K., Zeilinger, S., Singh, H. B., & Druzhinina, I. (2020). New and Future Developments in Microbial Biotechnology and Bioengineering - Recent Developments in Trichoderma Research. Elsevier. http://hdl.handle.net/20.500.12708/24742 ( reposiTUm)

Druzhinina, I., & Kubicek, C. P. (Eds.). (2016). Environmental and Microbial Relationships IV. Springer International Publishing. http://hdl.handle.net/20.500.12708/24159 ( reposiTUm)

Gupta, V. K., Schmoll, M., Herrera-Estrella, A., Upadhyay, R. S., Druzhinina, I., & Tuohy, M. G. (Eds.). (2014). Biotechnology and Biology of Trichoderma. Elsevier B.V. http://hdl.handle.net/20.500.12708/23816 ( reposiTUm)

Kubicek, C. P., & Druzhinina, I. (Eds.). (2007). The Mycota Vol.4 : Environmental and Microbial Relationships. Springer-Verlag. http://hdl.handle.net/20.500.12708/22267 ( reposiTUm)

Druzhinina, I., Kopchinskiy, A., & Kubicek, C. P. (Eds.). (2006). 8th European Conference on Fungal Genetics - Book of Abstracts. Manz Crossmedia. http://hdl.handle.net/20.500.12708/23283 ( reposiTUm)

Druzhinina, I. (2018). Trichoderma species on the genomic vastness. TG2018 - 15#^{th} International Trichoderma & Gliocladium Workshop, Salamanca, Spain. http://hdl.handle.net/20.500.12708/100890 ( reposiTUm)

Fischer, M., Parich, A., Kopchinskiy, A., Zettel, H., Laciny, A., Pretzer, C., Abu Salim, K., Druzhinina, I., & Schuhmacher, R. (2016). Voluntary self-sacrifice in “exploding” ants: a mechanism to defend co-evolved microbiomes? Seminar on Analytical Chemistry, Universiti Brunei Darussalam, Darussalam, Brunei, Brunei Darussalam. http://hdl.handle.net/20.500.12708/100072 ( reposiTUm)

Rahimi, M., Pretzer, C., Forte, A., Kopchinskiy, A., Davidson, D. W., Laciny, A., Grujic, M., Abu Salim, K., Lim, L., Chan, C. M., Fischer, M., Parich, A., Schuhmacher, R., Zettel, H., & Druzhinina, I. (2016). Microbial diversity in the habitat of Borneo’s “Exploding” Ants, Ants 2016-Ants and their biotic environment. An International Symposium at the University of Munich (LMU) and the Munich Botanical Garden, München, Germany. http://hdl.handle.net/20.500.12708/100071 ( reposiTUm)

Pretzer, C., Kopchinskiy, A., Laciny, A., Davidson, D. W., Lim, L., Chan, C. M., Zettel, H., Fischer, M., Parich, A., Schuhmacher, R., Abu Salim, K., & Druzhinina, I. (2016). Revealing molecular evolution of Borneo’s exploding ants of the Colobopis cylindrica complex, Ants 2016-Ants and their biotic environment. An International Symposium at the University of Munich (LMU) and the Munich Botanical Garden, München, Germany. http://hdl.handle.net/20.500.12708/100067 ( reposiTUm)

Laciny, A., Zettel, H., Kopchinskiy, A., Druzhinina, I., Pretzer, C., Fischer, M., Parich, A., Schuhmacher, R., Abu Salim, K., & Metscher, B. (2016). Of pests and guests - parasites and nest-mates in colonies of Bornean exploding ants of the Colobopsis cylindrica complex, Ants 2016-Ants and their biotic environment. An International Symposium at the University of Munich (LMU) and the Munich Botanical Garden, München, Germany. http://hdl.handle.net/20.500.12708/100065 ( reposiTUm)

Fischer, M., Parich, A., Kopchinskiy, A., Zettel, H., Laciny, A., Pretzer, C., Abu Salim, K., Druzhinina, I., & Schuhmacher, R. (2016). GC-MS based metabolomics of Borneo’s “exploding ants”: headspace solid phase microextraction of mandibular gland content, Ants 2016-Ants and their biotic environment. An International Symposium at the University of Munich (LMU) and the Munich Botanical Garden, München, Germany. http://hdl.handle.net/20.500.12708/100063 ( reposiTUm)

Fischer, M., Parich, A., Kopchinskiy, A., Zettel, H., Laciny, A., Pretzer, C., Abu Salim, K., Druzhinina, I., & Schuhmacher, R. (2016). Cuticular hydrocarbon profiles of Borneo’s “exploding ants” and their correlation with ant behavior, Ants 2016-Ants and their biotic environment. An International Symposium at the University of Munich (LMU) and the Munich Botanical Garden, München, Germany. http://hdl.handle.net/20.500.12708/100062 ( reposiTUm)

Marik, T., Szekeres, A., Druzhinina, I., Vágvölgyi, C., & Kredics, L. (2015). Sequential diversity of peptaibol profiles of Trichoderma species causing green mould disease of cultivated mushrooms. 17#^{th} International Congress of the Hungarian Society for Microbiology, Budapest, Ungarn, EU. http://hdl.handle.net/20.500.12708/99697 ( reposiTUm)

Szekeres, A., Kredics, L., Marik, T., Vagvölgyi, M., Bencsik, O., Kecskemeti, A., Leitgeb, B., Atanasova, L., Druzhinina, I., & Vágvölgyi, C. (2015). Verification of peptaibol production ability of a Trichoderma strain selected by a bacterium-based screening method. In http://fems-microbiology.kenes.com (p. 1). http://hdl.handle.net/20.500.12708/48935 ( reposiTUm)

Szekeres, A., Kredics, L., Marik, T., Vagvölgyi, M., Bencsik, O., Kecskemeti, A., Leitgeb, B., Atanasova, L., Druzhinina, I., & Vágvölgyi, C. (2015). Purification and structural elucidation strategy of peptaibols produced by Trichoderma strains. In http://fems-microbiology.kenes.com (p. 1). http://hdl.handle.net/20.500.12708/48936 ( reposiTUm)

Przylucka, A., Ribitsch, D., Herrero-Acero, E., Gübitz, G., Kubicek, C. P., & Druzhinina, I. (2014). Hydrophobins class I versus class II: Trichoderma virens HFB9a and HFB9b (class I) are more effective as enhancing agents in enzymatic PET hydrolysis and surface modulators compared to HFB4 and HFB7 (class II). ECB 16 - 16th European Congress on Biotechnology, Edinburgh, UK, EU. http://hdl.handle.net/20.500.12708/99537 ( reposiTUm)

Druzhinina, I. (2013). Trichoderma in Rhizosphere: Opportunists and Commensals. EMSL 2013 User Meeting, Richland, Washington, USA, Non-EU. http://hdl.handle.net/20.500.12708/99173 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I., & Grothe, H. (2012). Determining the ice nucleation of fungal spores in the oil immersion mode. Workshop: Bioaerosol Effects on Clouds, Steamboat Springs, Colorado, USA, Non-EU. http://hdl.handle.net/20.500.12708/98780 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I., & Grothe, H. (2012). Search for biogenic ice nucleation activity (INA) - a study on Snomax, pollen, moulds and mushrooms [Poster Presentation]. 16th International Conference on Clouds and Precipitation, Leipzig, Germany. http://hdl.handle.net/20.500.12708/47828 ( reposiTUm)

Pummer, B. G., Atanasova, L., Bauer, H., Bernardi, J., Druzhinina, I., & Grothe, H. (2012). Study on the ice nucleation activity of fungal spores (Ascomycota and Basidiomycota) [Poster Presentation]. EGU2012-2402. http://hdl.handle.net/20.500.12708/47870 ( reposiTUm)

Komon-Zelazowska, M., Kopchinskiy, A., Kubicek, C. P., & Druzhinina, I. (2011). Genus-wide screening for class II hydrophobins in Hypocrea/Trichoderma using phylogenetic and metagenomic approaches. Alpbacher Universitätenforum, Alpbach, Austria. http://hdl.handle.net/20.500.12708/98613 ( reposiTUm)

Lopandic, K., Bond, U., Atanasova, L., Druzhinina, I., & Sterflinger, K. (2011). Molecular characterisation of the yeast interspecies hybrids. 15#^{th} International Biodeterioration & Biodegredation Symposium, Wien, Austria. http://hdl.handle.net/20.500.12708/98611 ( reposiTUm)

Lehner, S., Neumann, N. K., Atanasova, L., Krska, R., Lemmens, M., Druzhinina, I., & Schuhmacher, R. (2011). Metabolic profiling of iron-containing metabolites secreted by Trichoderma using LC-HR-MS/MS. Metabomeeting 2011, Helsinki, Finnland, EU. http://hdl.handle.net/20.500.12708/98612 ( reposiTUm)

Tjandrawati Nugroho, T., Komon-Zelazowska, M., Atanasova, L., Kubicek, C. P., & Druzhinina, I. (2010). Strategy for the correct identification of Indonesian biocontrol fungi using molecular methods. The Gruber-Soedigo Lecture 2010, University of Groningen, Niederlande, EU. http://hdl.handle.net/20.500.12708/98455 ( reposiTUm)

Komon-Zelazowska, M., Mpika, J., Kubicek, C. P., & Druzhinina, I. (2007). Icommensurably low diversity of Hypocrea/Trichoderma in the rhizosphere of Theobroma cacao L. infected by black pod in Ivory Coast cacao plantation s. Biological Control Symposium, Graz, Austria. http://hdl.handle.net/20.500.12708/97614 ( reposiTUm)

Belayneh, T., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2007). Ethiopia as a hot spot for diversity of indigenous Hypocrea/Trichoderma species: screening for efficient agents to control coffee wilt disease. Biological Control Symposium, Graz, Austria. http://hdl.handle.net/20.500.12708/97615 ( reposiTUm)

Druzhinina, I., Kopchinski, A., Komon-Zelazowska, M., & Kubicek, C. P. (2005). An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. MBE 05, Auckland, New Zealand, Non-EU. http://hdl.handle.net/20.500.12708/96974 ( reposiTUm)

Kopchinski, A., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. (2005). TrichoBLAST: a multiloci database of phylogenetic markers for Trichoderma and Hypocrea powerd by sequence diagnosis and similarity search tool. MBE 05, Auckland, New Zealand, Non-EU. http://hdl.handle.net/20.500.12708/96975 ( reposiTUm)

Komon-Zelazowska, M., Poputnikova, T., Terekhova, V., Kubicek, C. P., & Druzhinina, I. (2004). Trichoderma biodiversity in virgin spruce south taiga ecosystems. Int. Symposium from Ecosystem Functioning to Biotechnology Application, Vienna , Austria, Austria. http://hdl.handle.net/20.500.12708/96642 ( reposiTUm)

Schmoll, M., Seiboth, B., Druzhinina, I., Pail, M., Seidl, V., Hartl, L., Gamauf, C., Komon-Zelazowska, M., Dorrer, M., Huemer, B., & Kubicek, C. P. (2004). Microbial enzymes for industrial application of renewable raw materials: molecular basis for strain improvement in Trichoderma . 1.Minisysmposium für Nachwachsende Rohstoffe und Erneuerbare Energien, Wien, Austria. http://hdl.handle.net/20.500.12708/96480 ( reposiTUm)

Druzhinina, I., & Palma-Oliveira, J. M. (2002). Contaminated mushrooms: objective hazards versus the lay risk perception. Society of Risk Analysis - Europe, 12th Annual Meeting, Berlin, Germany, Austria. http://hdl.handle.net/20.500.12708/95939 ( reposiTUm)

Palma-Oliveira, J. M., Druzhinina, I., & Antunes, D. (2002). Local "heaven in a “hell” of a word: ecological risk perception in its context. Society of Risk Analysis Annual Meeting, New Orleans, USA, Austria. http://hdl.handle.net/20.500.12708/95940 ( reposiTUm)

Druzhinina, I., & Palma-Oliveira, J. M. (2002). Radioactive contamination of wild mushrooms: a cross-cultural risk perception study. International Conference on Radioactivity in the Environment, Monaco, Austria. http://hdl.handle.net/20.500.12708/95941 ( reposiTUm)

Druzhinina, I., & Kubicek, C. P. (2010). Large scale screening for new Hypocrea/Trichoderma isolates active in biological control of pests. http://hdl.handle.net/20.500.12708/36769 ( reposiTUm)

Kubicek, C. P., Allmaier, G., Mach, R. L., & Druzhinina, I. (2009). Multidisziplinäre Detektion und Beurteilung einheimischer Fusarien (Endbericht). http://hdl.handle.net/20.500.12708/35745 ( reposiTUm)

Kubicek, C. P., & Druzhinina, I. (2009). Biosprit aus Algen (Endbericht). http://hdl.handle.net/20.500.12708/35746 ( reposiTUm)

Kubicek, C. P., & Druzhinina, I. (2009). Large scale screening for new Hypocrea / Trichoderma isolates active in biological control of pests (1.Zwischenbericht). http://hdl.handle.net/20.500.12708/35748 ( reposiTUm)

Kubicek, C. P., & Druzhinina, I. (2007). Population genetics and phylogeny of Trichoderma. http://hdl.handle.net/20.500.12708/32685 ( reposiTUm)

Druzhinina, I. (2007). Idendification of fout Trichoderma strains for industrial use GEPROMA 3, Final Projekt Report. http://hdl.handle.net/20.500.12708/32689 ( reposiTUm)

Mach, R. L., Reischer, G., Kubicek, C. P., & Druzhinina, I. (2004). Eine kritische Beurteilung der biologischen Aktivität heimischer Fusarium spp. auf natürlichen Substraten. http://hdl.handle.net/20.500.12708/32316 ( reposiTUm)

Druzhinina, I. S. (2010). Evolution, diversity and ecophysiology of Trichoderma [Professorial Dissertation, Technische Universität Wien]. reposiTUm. http://hdl.handle.net/20.500.12708/159542 ( reposiTUm)