Atanasova, L., Marchetti-Deschmann, M., Nemes, A., Bruckner, B., Rehulka, P., Stralis-Pavese, N., Łabaj, P., Kreil, D. P., & Zeilinger, S. (2023). Mycoparasitism related targets of Tmk1 indicate stimulating regulatory functions of this MAP kinase in Trichoderma atroviride. Scientific Reports, 13, Article 19976. https://doi.org/10.1038/s41598-023-47027-6 ( reposiTUm)

Missbach, K., Flatschacher, D., Bueschl, C., Samson, J. M., Leibetseder, S., Marchetti-Deschmann, M., Zeilinger, S., & Schuhmacher, R. (2023). Light-induced changes in secondary metabolite production of Trichoderma atroviride. Journal of Fungi, 9(8), Article 785. https://doi.org/10.3390/jof9080785 ( reposiTUm)

Atanasova, L., Gruber, S., Lichius, A., Radebner, T., Abendstein, L., Münsterkötter, M., Stralis-Pavese, N., Labaj, P., Kreil, D., & Zeilinger, S. (2018). The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride. Scientific Reports, 8(12064). https://doi.org/10.1038/s41598-018-30500-y ( reposiTUm)

Reismann, A., Atanasova, L., Schrangl, L., Zeilinger, S., & Schütz, G. (2018). Temporal Filtering to Improve Single Molecule Identification in High Background Samples. Molecules, 23(12), 3338. https://doi.org/10.3390/molecules23123338 ( reposiTUm)

Zeilinger, S., Gupta, V. K., Dahms, T. E. S., Silva, R. N., Singh, H. B., Upadhyay, R. S., Gomes, E. V., Tsui, C. K.-M., & Nayak S, C. (2016). Friends or foes? Emerging insights from fungal interactions with plants. FEMS Microbiology Reviews, 40(2), 182–207. https://doi.org/10.1093/femsre/fuv045 ( reposiTUm)

Schmoll, M., Dattenböck, C., Carreras-Villasenor, N., Mendoza-Mendoza, A., Tisch, D., Aleman, M. I., Baker, S. E., Frischmann, A., Seidl-Seiboth, V., & Zeilinger, S. (2016). The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species. Microbiology and Molecular Biology Reviews, 80(1), 205–327. http://hdl.handle.net/20.500.12708/149296 ( reposiTUm)

Holzlechner, M., Reitschmidt, S., Gruber, S., Zeilinger, S., & Marchetti-Deschmann, M. (2016). Visualizing fungal metabolites during mycoparasitic interaction by MALDI mass spectrometry imaging. Proteomics, 16(11–12), 1742–1746. http://hdl.handle.net/20.500.12708/149292 ( reposiTUm)

Neumann, N. K., Stoppacher, N., Zeilinger-Migsich, S., Degenkolb, T., Brückner, H., & Schuhmacher, R. (2015). The Peptaibiotics Database - A Comprehensive Online Resource. Chemistry and Biodiversity, 12, 743–751. http://hdl.handle.net/20.500.12708/151906 ( reposiTUm)

Zeilinger-Migsich, S., & Mukherjee, P. K. (2014). Fungus-Fungus Interactions. The Open Mycology Journal, 8(1), 27–27. https://doi.org/10.2174/1874437001408010027 ( reposiTUm)

Zeilinger, S., Gruber, S. G., Escobar Rodriguez, C., Labaj, P., & Kreil, D. (2014). Dissecting the role of the 7-transmembrane receptor Gpr1 in the biocontrol fungus Trichoderma atroviride using a transcriptomics approach. Journal of Biotechnology & Biomaterials, 3(5), 249. http://hdl.handle.net/20.500.12708/157310 ( reposiTUm)

Zeilinger, S., & Gruber, S. G. (2014). The transcription factor TaSte12 mediates the regulatory role of the Tmk1 MAP kinase in mycoparasitism and vegetative hyphal fusion in Trichoderma atroviride. BIOspektrum, 20, 99. http://hdl.handle.net/20.500.12708/157306 ( reposiTUm)

Gruber, S., & Zeilinger, S. (2014). The Transcription Factor Ste12 Mediates the Regulatory Role of the Tmk1 MAP Kinase in Mycoparasitism and Vegetative Hyphal Fusion in the Filamentous Fungus Trichoderma atroviride. PLoS ONE, 9(10), e111636. https://doi.org/10.1371/journal.pone.0111636 ( reposiTUm)

Zeilinger, S., Nemes, A., Labaj, P., Marchetti-Deschmann, M., Kreil, D., & Gruber, S. G. (2014). How MAP kinase signaling regulates the transcriptomic and proteomic response of the biocontrol fungus Trichoderma atroviride. Journal of Biotechnology & Biomaterials, 3(5), 107–107. http://hdl.handle.net/20.500.12708/157302 ( reposiTUm)

Stoppacher, N., Neumann, N. K., Burgstaller, L., Zeilinger, S., Degenkolb, T., Brückner, H., & Schuhmacher, R. (2013). The Comprehensive Peptaibiotics Database. Chemistry and Biodiversity, 10, 734–743. http://hdl.handle.net/20.500.12708/156316 ( reposiTUm)

Crutcher, F. K., Parich, A., Schuhmacher, R., Mukherjee, P. K., Zeilinger, S., & Kenerley, C. M. (2013). A putative terpene cyclase, vir4, is responsible for the biosynthesis of volatile terpene compounds in the biocontrol fungus Trichoderma virens. Fungal Genetics and Biology, 56, 67–77. https://doi.org/10.1016/j.fgb.2013.05.003 ( reposiTUm)

Gruber, S., Omann, M., & Zeilinger, S. (2013). Comparative analysis of the repertoire of G protein-coupled receptors of three species of the fungal genus Trichoderma. BMC Microbiology, 13(108). https://doi.org/10.1186/1471-2180-13-108 ( reposiTUm)

Mukherjee, M., Mukherjee, P. K., Horwitz, B. A., Zachow, C., Berg, G., & Zeilinger, S. (2012). Trichoderma-Plant-Pathogen Interactions: Advances in Genetics of Biological Control. Indian Journal of Microbiology, 52(4), 522–529. https://doi.org/10.1007/s12088-012-0308-5 ( reposiTUm)

Gruber, S., Omann, M., Rodrìguez, C. E., Radebner, T., & Zeilinger, S. (2012). Generation of Trichoderma atroviride mutants with constitutively activated G protein signaling by using geneticin resistance as selection marker. BMC Research Notes, 5(641). https://doi.org/10.1186/1756-0500-5-641 ( reposiTUm)

Omann, M. R., Lehner, S., Escobar Rodríguez, C., Brunner, K., & Zeilinger, S. (2012). The seven-transmembrane receptor Gpr1 governs processes relevant for the antagonistic interaction of Trichoderma atroviride with its host. Microbiology, 158(1), 107–118. https://doi.org/10.1099/mic.0.052035-0 ( reposiTUm)

Kubicek, C. P., Herrera-Estrella, A., Seidl-Seiboth, V., Martinez, D. A., Druzhinina, I., Thon, M., Zeilinger, S., Casas-Flores, S., Horwitz, B. A., Mukherjee, P. K., Mukherjee, M., Kredics, L., Alcaraz, L. D., Aerts, A., Antal, Z., Atanasova, L., Cervantes-Badillo, M. G., Challacombe, J., Chertkov, O., … Grigoriev, I. V. (2011). Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biology, 12, Article R40. https://doi.org/10.1186/gb-2011-12-4-r40 ( reposiTUm)

Druzhinina, I. S., Seidl-Seiboth, V., Herrera-Estrella, A., Horwitz, B. A., Kenerley, C. M., Monte, E., Mukherjee, P. K., Zeilinger, S., Grigoriev, I. V., & Kubicek, C. P. (2011). Trichoderma : the genomics of opportunistic success. Nature Reviews Microbiology, 9(10), 749–759. https://doi.org/10.1038/nrmicro2637 ( reposiTUm)

Omann, M., & Zeilinger, S. (2010). How a Mycoparasite Employs G-Protein Signaling : Using the Example of Trichoderma. Journal of Signal Transduction, 2010, 1–8. https://doi.org/10.1155/2010/123126 ( reposiTUm)

Stoppacher, N., Kluger, B., Zeilinger, S., Krska, R., & Schuhmacher, R. (2010). Identification and profiling of volatile metabolites of the biocontrol fungus Trichoderma atroviride by HS-SPME-GC-MS. Journal of Microbiological Methods, 81(2), 187–193. https://doi.org/10.1016/j.mimet.2010.03.011 ( reposiTUm)

Seidl, V., Song, L., Lindquist, E., Gruber, S. G., Koptchinskiy, A., Zeilinger, S., Schmoll, M., Martínez, P., Sun, J., Grigoriev, I., Herrera-Estrella, A., Baker, S. E., & Kubicek, C. P. (2009). Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey. BMC Genomics, 10(567). https://doi.org/10.1186/1471-2164-10-567 ( reposiTUm)

Brunner, K., Omann, M., Pucher, M. E., Delic, M., Lehner, S. M., Domnanich, P., Kratochwill, K., Druzhinina, I., Denk, D., & Zeilinger, S. (2008). Trichoderma G protein-coupled receptors : functional characterisation of a cAMP receptor-like protein from Trichoderma atroviride. Current Genetics, 54(6), 283–299. https://doi.org/10.1007/s00294-008-0217-7 ( reposiTUm)

Stoppacher, N., Zeilinger, S., Omann, M., Lassahn, P.-G., Roitinger, A., Krska, R., & Schuhmacher, R. (2008). Characterisation of the peptaibiome of the biocontrol fungus Trichoderma atroviride by liquid chromatography/tandem mass spectrometry. Rapid Communications in Mass Spectrometry, 22(12), 1889–1898. https://doi.org/10.1002/rcm.3568 ( reposiTUm)

Zeilinger, S., & Omann, M. (2007). Trichoderma Biocontrol: Signal Transduction Pathways Involved in Host Sensing and Mycoparasitism. Gene Regulation and Systems Biology, 1, 227–234. http://hdl.handle.net/20.500.12708/169489 ( reposiTUm)

Reithner, B., Schuhmacher, R., Stoppacher, N., Pucher, M., Brunner, K., & Zeilinger, S. (2007). Signaling via the Trichoderma atroviride mitogen-activated protein kinase Tmk 1 differntially affects mycoparasitism and plant protection. Fungal Genetics and Biology, 44, 1123–1133. http://hdl.handle.net/20.500.12708/169487 ( reposiTUm)

Stoppacher, N., Reithner, B., Omann, M., Zeilinger, S., Krska, R., & Schuhmacher, R. (2007). Profiling of trichorzianines in culture samples of Trichoderma atroviride by liquid chromatography/tandem mass spectrometry. Rapid Communications in Mass Spectrometry, 21, 3963–3970. http://hdl.handle.net/20.500.12708/169488 ( reposiTUm)

Rauscher, R., Würleitner, E., Wacenovsky, C., Aro, N., Stricker, A. R., Zeilinger, S., Kubicek, C. P., Penttilä, M. E., & Mach, R. L. (2006). Transciptional Regulation of xyn1, Encoding Xylanase I, in Hypocrea jecorina. Eukaryotic Cell, 5(7), 447–456. http://hdl.handle.net/20.500.12708/173250 ( reposiTUm)

Brunner, K., Zeilinger, S., Ciliento, R., Woo, S. L., Lorito, M., Kubicek, C. P., & Mach, R. L. (2005). Improvement of the Fungal Biocontrol Agent Trichoderma atroviride To Enhance both Antagonism and Induction of Plant Systemic Disease Resistance. Applied and Environmental Microbiology, 71(7), 3959–3965. http://hdl.handle.net/20.500.12708/172914 ( reposiTUm)

Zeilinger, S., Reithner, B., Scala, V., Peissl, I., Lorito, M., & Mach, R. L. (2005). Signal Transduction by Tga3, a Novel G Protein α Subnuit of Trichoderma atroviride. Applied and Environmental Microbiology, 71(3), 1591–1597. http://hdl.handle.net/20.500.12708/172912 ( reposiTUm)

Reithner, B., Brunner, K., Schuhmacher, R., Peissl, I., Seidl, V., Krska, R., & Zeilinger, S. (2005). The G protein α subunit Tga1 of Trichoderma atroviride is involved in chitinase formation and differential production of antifungal metabolites. Fungal Genetics and Biology, 42, 749–760. http://hdl.handle.net/20.500.12708/172916 ( reposiTUm)

Moreno-Ruiz, D., Fuchs, A., & Zeilinger, S. (2020). The effects of light on Trichoderma atroviride conidiation and mycoparasitic activity are partially dependent on the strain and the Tmk3 MAP kinase. In Program & Abstracts (pp. 357–358). http://hdl.handle.net/20.500.12708/50781 ( reposiTUm)

Moreno-Ruiz, D., Lichius, A., Turra, D., Di Pietro, A., & Zeilinger, S. (2020). Mycoparasitism-related chemotropic sensing in Trichoderma atroviride germlings and hyphae. In Program & Abstracts (pp. 358–359). http://hdl.handle.net/20.500.12708/50777 ( reposiTUm)

Segreto, R., Bazafkan, H., Millinger, J., Doppler, M., Blueschl, C., Schuhmacher, R., Atanasova, L., & Zeilinger, S. (2020). Trichoderma atroviride mycoparasitism and its regulation by the TOR signaling pathway. In Program & Abstracts (pp. 178–179). http://hdl.handle.net/20.500.12708/49581 ( reposiTUm)

Speckbacher, V., Ruszsanyi, V., Hinterdobler, W., Schuhmacher, R., & Zeilinger, S. (2020). The lipoxygenase gene lox1 is involved in light- and injury-response as weil as volatile secondary metabolite production in Trichoderma atroviride. In Program & Abstracts (pp. 75–76). http://hdl.handle.net/20.500.12708/49579 ( reposiTUm)

Atanasova, L., & Zeilinger, S. (2018). lnterplay between GPI-anchored a-1,6-mannanase DfgS and MAPK signaling in cell wall remodefing of the mycoparasite Trichoderma atroviride. In Program & Abstracts (p. 123). http://hdl.handle.net/20.500.12708/50380 ( reposiTUm)

Zeilinger, S., Gruber, S., Lichius, A., Radebner, T., Labaj, P., & Kreil, D. (2016). Host sensing and attack in the mycoparasite Trichoderma atroviride: the 7-TM receptor Gpr1 and its putative interactor, a Sur7 -family protein. In Abstract Book (p. 53). http://hdl.handle.net/20.500.12708/49431 ( reposiTUm)

Nemes, A., Bruckner, B., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2015). (Phospho-)proteome changes during mycoparasitism in the fungus Trichoderma atroviride. In Book of Abstracts (p. 30). http://hdl.handle.net/20.500.12708/49213 ( reposiTUm)

Zeilinger-Migsich, S. (2015). From Genes to Biocontrol: Molecular Mechanisms of a Mycoparasitic Fungus. In Abstracts (p. 1). http://hdl.handle.net/20.500.12708/49180 ( reposiTUm)

Nemes, A., Bruckner, B., Gruber, S. G., Rehulka, P., Allmaier, G., Zeilinger, S., & Marchetti-Deschmann, M. (2014). Phosphoproteome changes during mycoparasitism in the fungus Trichoderma atroviride. In Abstractbook (p. 1). http://hdl.handle.net/20.500.12708/48748 ( reposiTUm)

Zeilinger, S. (2014). Insights into MAP kinase signaling in the mycoparasitic fungus Trichoderma atroviride. In Joint International Symposium on Mechanisms of Cellular Compartmentalization (p. 30). http://hdl.handle.net/20.500.12708/48767 ( reposiTUm)

Nemes, A., Gruber, S. G., Labaj, P., Marchetti-Deschmann, M., Kreil, D., & Zeilinger, S. (2013). A transcriptomic and proteomic approach to dissect MAP kinase signaling in the mycoparasitic fungus Trichoderma atroviride. In XI International Fungal Biology Conference (p. 31). http://hdl.handle.net/20.500.12708/48470 ( reposiTUm)

Gruber, S. G., Escobar Rodriguez, C., Labaj, P., Kreil, D., & Zeilinger, S. (2013). The Gpr1 7-transmembrane receptor from the mycoparasite Trichoderma atroviride, its targets and interactors. In XI International Fungal Biology Conference (p. 105). http://hdl.handle.net/20.500.12708/48334 ( reposiTUm)

Nemes, A., Bruckner, B., Gruber, S. G., Allmaier, G., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2013). Identification of Regulators of Mycoparasitism of the Fungus Trichoderma atroviride by Phosphoproteomics. In Book of Abstract (p. 41). http://hdl.handle.net/20.500.12708/48409 ( reposiTUm)

Nemes, A., Gruber, S. G., Marchetti-Deschmann, M., & Zeilinger, S. (2013). MAPK signaling and mycoparasitism: transcriptomic and proteomic approaches to dissect the mycoparasitic interaction of the biocontrol fungus Trichoderma with phytopathogenic host fungi. In BIOspektrum - Tagungsband zur Jahrestagung fer VAAM 2013 (p. 88). Springer Spektrum. http://hdl.handle.net/20.500.12708/48127 ( reposiTUm)

Nemes, A., Kreil, D., Allmaier, G., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2013). TRICHODERMA ATROVIRIDE - A Proteomic And Genomic Approach To Identify Regulators Of Mycoparasitism In A Biocontrol Fungus. In EUPA 2013 Scientific Meeting (pp. 335–336). http://hdl.handle.net/20.500.12708/48385 ( reposiTUm)

Nemes, A., Bruckner, B., Allmaier, G., Kreil, D., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2013). Identification of Regulators of Mycoparasitism of the Fungus Trichoderma atroviride. In 11th Austrian Proteomic Research Symposium (p. 43). http://hdl.handle.net/20.500.12708/48384 ( reposiTUm)

Escobar Rodriguez, C., Omann, M., & Zeilinger, S. (2012). Identification of novel interactors of the Trichoderma atroviride Gpr1 7-transmembrane receptor. In Meeting Abstracts (p. 202). http://hdl.handle.net/20.500.12708/47910 ( reposiTUm)

Nemes, A., Bruckner, B., Rehulka, P., Zeilinger, S., Allmaier, G., & Marchetti-Deschmann, M. (2012). Trichoderma atroviridiae identifying regulators of mycoparasitism in a biocontrol fungus. In 6th Central and Eastern European Proteomic Conference - Book of Abstracts (p. 58). http://hdl.handle.net/20.500.12708/48108 ( reposiTUm)

Omann, M., Escobar Rodriguez, C., & Zeilinger, S. (2011). Signal Transduction in the Biocontrol Agent Trichoderma Atroviride : News and Highlights. In BIT’s 1#^{st} Annual World Congress of Microbes-2011 (p. 261). http://hdl.handle.net/20.500.12708/47537 ( reposiTUm)

Zeilinger, S. (2011). New insights into the mycoparasitic lifestyle of Trichoderma and the involvement of G protein signalling therein. In Conference Book of the 10#^{th} VAAM Symposium “Molecular Biology of Fungi” (p. 57). http://hdl.handle.net/20.500.12708/47538 ( reposiTUm)

Karimi Aghcheh, R., Bok, J. W., Omann, M., Zeilinger, S., Linke, R., Seiboth, B., Baker, S. E., Keller, N. P., & Kubicek, C. P. (2011). The Trichoderma LaeA orthologue LAE1 identifies new targets of epigenetic regulation in fungi. In Fungal Genetics Report (p. 174). http://hdl.handle.net/20.500.12708/47548 ( reposiTUm)

Parich, A., Kluger, B., Zeilinger, S., Mukherjee, P., Crutcher, F., Kenerley, C., & Schuhmacher, R. (2011). Study of the volatile metabolome of different species of the filamentous fungus Trichoderma. In metabomeeting 2011 (pp. 117–118). http://hdl.handle.net/20.500.12708/47539 ( reposiTUm)

Zeilinger, S., & Omann, M. (2010). The G protein-coupled receptor Gpr1 is required for host recognition and mycoparasitism in the biocontrol agent Trichoderma atroviride. In Meeting Abstracts (p. 64). http://hdl.handle.net/20.500.12708/47073 ( reposiTUm)

Omann, M., Escobar Rodriguez, C., & Zeilinger, S. (2010). The role of G-Protein signaling in the biocontrol agent Trichoderma atroviride. In Book of Abstracts (p. 21). http://hdl.handle.net/20.500.12708/47074 ( reposiTUm)

Omann, M., Lehner, S., Escobar Rodriguez, C., Stoppacher, N., & Zeilinger, S. (2010). Role of G protein signalling in host sensing of the mycoparasite Trichoderma atroviride. In IOBC/WPRS Working Group (p. 46). http://hdl.handle.net/20.500.12708/47085 ( reposiTUm)

Omann, M., Escobar Rodriguez, C., & Zeilinger, S. (2010). Host recognition and mycoparasitism in the biocontrol agent Trichoderma atroviride : the role of G protein signaling. In IMC9 The Biology of Fungi. 9#^{th} International Mycological Congress, Edinburgh, UK, EU. http://hdl.handle.net/20.500.12708/47083 ( reposiTUm)

Stoppacher, N., Kluger, B., Zeilinger, S., Krska, R., & Schuhmacher, R. (2010). Volatile secondary metabolites of the biocontrol fungus Trichoderma atroviride : Profiling by HS-SPME-GC-MS. In IOBC/WPRS Working Group (p. 47). http://hdl.handle.net/20.500.12708/47084 ( reposiTUm)

Schuhmacher, R., Lehner, S., Zeilinger, S., Stoppacher, N., & Krska, R. (2010). Determination of Extracellular Siderophores of Trichoderma atroviride by High Resolution Liquid Chromatography - Mass Spectrometry. In Book of Abstracts (p. 56). http://hdl.handle.net/20.500.12708/47076 ( reposiTUm)

Stoppacher, N., Zeilinger, S., Krska, R., & Schuhmacher, R. (2010). Screening for peptaibiotics in commercially available Trichoderma biocontrol products by LC-MS/MS. In IOBC/WPRS Working Group (p. 143). http://hdl.handle.net/20.500.12708/47082 ( reposiTUm)

Stoppacher, N., Schwarzböck, M., Zeilinger, S., Krska, R., & Schuhmacher, R. (2010). The Peptaibiotics Database - a valuable tool for the research on Aib-peptides. In Book of Abstracts (p. 57). http://hdl.handle.net/20.500.12708/47075 ( reposiTUm)

Omann, M., & Zeilinger, S. (2009). The G protein-coupled receptor Gpr1 is involved in mycoparasitism of Trichoderma atroviride. In MAPK Signalling during Fungal Pathogenesis - Book of Abstracts. SIGNALPATH Final Network Meeting, Berlin, Deutschland, EU. http://hdl.handle.net/20.500.12708/46268 ( reposiTUm)

Brunner, K., Pucher, M., Delic, M., Domnanich, P., Omann, M., & Zeilinger, S. (2008). Trichoderma atroviride G protein-coupled receptors of the cAMP receptor-like class : isolation, transcriptional regulation and involvement in host sensing. In 9#^{th} European Conference on Fungal Genetics - Meeting Abstracts (p. 121). http://hdl.handle.net/20.500.12708/46271 ( reposiTUm)

Stoppacher, N., Zeilinger, S., Omann, M., Krska, R., & Schuhmacher, R. (2008). Antifungal peptides of the biocontrol fungus Trichoderma atroviride-detection and structure characterisation by LC-MS/MS. In Molecular Tools for Understanding and Improving Biocontrol - Abstract Book (p. 13). http://hdl.handle.net/20.500.12708/46280 ( reposiTUm)

Omann, M., Lehner, S., Brunner, K., Delic, M., Stoppacher, N., Schuhmacher, R., Pucher, M., & Zeilinger, S. (2008). A cAMP receptor-like GPCR is involved in Trichoderma atroviride mycoparasitism. In Molecular Tools for Understanding and Improving Biocontrol - Abstract Book (p. 18). http://hdl.handle.net/20.500.12708/46279 ( reposiTUm)

Kluger, B., Lehner, S., Stoppacher, N., Zeilinger, S., Krska, R., & Schuhmacher, R. (2008). Determination of volatile metabolites of the biocontrol fungus Trichoderma atroviride by GC/MS. In Molecular Tools for Understanding and Improving Biocontrol - Abstract Book (p. 64). http://hdl.handle.net/20.500.12708/46278 ( reposiTUm)

Omann, M., Lehner, S., Delic, M., Stoppacher, N., Schuhmacher, R., Brunner, K., & Zeilinger, S. (2008). Involvement of the G protein-coupled receptor Gpr1 in mycoparasitism of Trichoderma atroviride. In First German/ French/ European/ Meeting on Yeast and Filamentous Fungi (p. 19). http://hdl.handle.net/20.500.12708/46287 ( reposiTUm)

Stoppacher, N., Reithner, B., Zeilinger, S., Krska, R., & Schuhmacher, R. (2007). Detection and Structure Characterization of Novel Peptaibols in Trichoderma Atroviride Culture Samples. In Proc. of XIII International Congress on Molecular Plant - Microbe Interactions. XIII International Congress on Molecular Plant - Microbe Interactions, Sorrento, Italy, EU. http://hdl.handle.net/20.500.12708/45988 ( reposiTUm)

Ciliento, R., Woo, S. L., Brunner, K., Marra, R., Vinale, F., Ferraioli, S., Ambrosino, P., Soriente, I., Ruocco, M., Turra, D., Lanzuise, S., Gigante, S., Mach, R. L., Zeilinger, S., & Lorito, M. (2006). Genetic improvement of Trichoderma harzianum strain T22 using an inducible promoter and the Aspergillus niger goxA gene. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/47244 ( reposiTUm)

Zembek, P. B., Brunner, K., Reithner, B., Palamarczyk, G., Zeilinger, S., Mach, R. L., & Kruszewska, J. S. (2006). Improvement of biocontrol properties of T.atroviride P1 strain by increased glycosylation abilities. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/47243 ( reposiTUm)

Zembek, P. B., Brunner, K., Reithner, B., Palamarczyk, G., Zeilinger, S., Mach, R. L., & Kruszewska, J. S. (2006). Metabolic engineering of glycosylation pathway affects biocontrol properties of Trichoderma atroviride. In Book of Abstracts (p. 310). http://hdl.handle.net/20.500.12708/45665 ( reposiTUm)

Reithner, B., Schuhmacher, R., & Zeilinger, S. (2006). The mitogen-activated protein kinase Tmk1 is involved in Trichoderma atroviride mycoparasitism. In Book of Abstracts (p. 184). http://hdl.handle.net/20.500.12708/45450 ( reposiTUm)

Stoppacher, N., Reithner, B., Zeilinger, S., Brunner, K., Mach, R. L., Krska, R., & Schuhmacher, R. (2006). Screening for Atroviridins, Neoatroviridins and Harzianins in Culture Samples of Trichoderma atroviride using LC-MS/MS. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/47242 ( reposiTUm)

Reithner, B., Schuhmacher, R., & Zeilinger, S. (2006). Tmk1, a Trichoderma atroviride MAP-kinase, and its role in the mycoparasitic response. In Book of Abstracts. 9#^{th} International Workshop on Trichoderma and Gliocladium, Wien, Austria. http://hdl.handle.net/20.500.12708/45659 ( reposiTUm)

Reithner, B., Schuhmacher, R., & Zeilinger, S. (2005). The role of Tga1, a Gα subunit, in biocontrol of Trichoderma atroviride. In Molekular Biology of Fungi (p. 70). http://hdl.handle.net/20.500.12708/45233 ( reposiTUm)

Schmoll, M., Zeilinger, S., Mach, R. L., & Kubicek, C. P. (2002). A Rapid Subtraction Hybridization protocol (RaSH) for identification of genes whose expression is impaired in the cellulase negative mutant strain Hypocrea jecorina QM9978. In Joint Annual Meeting of the ÖGBM,ÖGGGT,ÖGBT,ANGT (p. 65). http://hdl.handle.net/20.500.12708/47253 ( reposiTUm)

Schmoll, M., Zeilinger, S., Mach, R. L., & Kubicek, C. P. (2002). A rapid substraction hybridization protocol (RaSH) for identification of genes whose expression is impaired in the cellulase-neagative mutant strain Hypocrea jecorina QM 9978. In Proceedings of the 6#^{th} European Conference on fungal genetics (p. 214). http://hdl.handle.net/20.500.12708/45072 ( reposiTUm)

Zeilinger, S. (2019). Peptaibiotics and peptaibols from fungi. In Fungal Biomolecules - Sources, Applications and Recent Developments (pp. 101–113). Wiley - Blackwell. http://hdl.handle.net/20.500.12708/30014 ( reposiTUm)

Zeilinger, S., Garcia-Estrada, C., & Martin, J.-F. (2015). Fungal Secondary Metabolites in the “OMICS” Era. In S. Zeilinger, J.-F. Martin, & C. Garcia-Estrada (Eds.), Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites (Vol. 2, pp. 1–12). Springer Science + Business Media. https://doi.org/10.1007/978-1-4939-2531-5_1 ( reposiTUm)

Zeilinger, S., & Gruber, S. (2014). Insights into Signaling Pathways of Antagonistic Trichoderma Species. In V. K. Gupta, M. Schmoll, A. Herrera-Estrella, R. S. Upadhyay, I. Druzhinina, & M. G. Tuohy (Eds.), Biotechnology and Biology of Trichoderma (pp. 465–476). Elsevier B.V. https://doi.org/10.1016/b978-0-444-59576-8.00034-5 ( reposiTUm)

Kluger, B., Zeilinger, S., Wiesenberger, G., Schöfbeck, D., & Schuhmacher, R. (2013). Detection and Identification of Fungal Microbial Volatile Organic Compounds by HS-SPME-GC–MS. In V. K. Gupta, M. G. Tuohy, M. Ayychamy, K. M. Turner, & A. Donovan (Eds.), Laboratory Protocols in Fungal Biology (pp. 455–465). Springer Science + Business Media. https://doi.org/10.1007/978-1-4614-2356-0_42 ( reposiTUm)

Zeilinger, S., & Schuhmacher, R. (2013). Volatile Organic Metabolites of Trichoderma spp. : Biosynthesis, Biology and Analytics. In P. Mukherjee, B. A. Horwitz, U. S. Singh, M. Mukherjee, & M. Schmoll (Eds.), Trichoderma Biology and Applications (pp. 110–127). CABI. http://hdl.handle.net/20.500.12708/28206 ( reposiTUm)

Brunner, K., Zeilinger, S., Reithner, B., Omann, M., & Mach, R. L. (2009). Trichoderma as Biocontrol Agent: Potentials and Limitations of Strain Improvement. In Agriculturally Important Microorganisms (pp. 153–164). Academic World International. http://hdl.handle.net/20.500.12708/26268 ( reposiTUm)

Zeilinger, S., Reithner, B., Brunner, K., & Omann, M. (2009). Signal Transduction in Host Sensing and Mycoparasitism of Trichoderma Biocontrol Strains. In Agriculturally Important Microorganisms (pp. 165–175). Academic World International. http://hdl.handle.net/20.500.12708/26269 ( reposiTUm)

Omann, M., Lehner, S., Brunner, K., Delic, M., Stoppacher, N., Schuhmacher, R., Pucher, M., & Zeilinger, S. (2009). A cAMP receptor-like GPCR is involved in Trichoderma atroviride mycoparasitism. In IOBC/WPRS Bulletin (pp. 105–108). IOBC/WPRS. http://hdl.handle.net/20.500.12708/26592 ( reposiTUm)

Schuhmacher, R., Stoppacher, N., Reithner, B., Omann, M., Zeilinger, S., & Krska, R. (2009). Antifungal peptides of the biocontrol fungus Trichoderma atroviride-detection and structure characterisation by LC-MS/MS. In IOBC/WPRS Bulletin (pp. 45–48). IOBC/WPRS. http://hdl.handle.net/20.500.12708/26591 ( reposiTUm)

Kluger, B., Lehner, S., Stoppacher, N., Zeilinger, S., Krska, R., & Schuhmacher, R. (2009). Determination of volatile metabolites of the biocontrol fungus Trichoderma atroviride by GC/MS. In IOBC/WPRS Bulletin (pp. 145–148). IOBC/WPRS. http://hdl.handle.net/20.500.12708/26593 ( reposiTUm)

Brunner, K., Zeilinger, S., & Mach, R. L. (2007). Molecular Approaches for Studying Fungi in the Environment. In Environmental and Microbial Relationships,2nd Edition The Mycota (pp. 18–27). Springer-Verlag. http://hdl.handle.net/20.500.12708/25321 ( reposiTUm)

Schuhmacher, R., Stoppacher, N., & Zeilinger, S. (2007). Peptaibols of Trichoderma atroviride: screening, identification, and structur elucidation by liquid chromatography-tandem mass spectrometry. In Communicating Current Research and Education Topics and Trends in Applied Microbiology (pp. 609–617). FORMATEX. http://hdl.handle.net/20.500.12708/25323 ( reposiTUm)

Gupta, V. K., Zeilinger, S., Singh, H. B., & Druzhinina, I. (2020). New and Future Developments in Microbial Biotechnology and Bioengineering - Recent Developments in Trichoderma Research. Elsevier. http://hdl.handle.net/20.500.12708/24742 ( reposiTUm)

Zeilinger, S., Martin, J.-F., & Garcia-Estrada, C. (Eds.). (2015). Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites, Volume 2. Springer Science + Business Media. https://doi.org/10.1007/978-1-4939-2531-5 ( reposiTUm)

Martin, J.-F., Garcia-Estrada, C., & Zeilinger, S. (2014). Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites. Springer. https://doi.org/10.1007/978-1-4939-1191-2 ( reposiTUm)

Zeilinger-Migsich, S. (2018). Trichoderma atroviride secondary metabolism and its regulation by signaling pathways. TG2018 - 15#^{th} International Trichoderma & Gliocladium Workshop, Salamanca, Spain. http://hdl.handle.net/20.500.12708/100889 ( reposiTUm)

Zeilinger, S., Atanasova, L., Lichius, A., Bazafkan, H., Speckbacher, V., Schenk, M., Schuhmacher, R., Doppler, M., & Marchetti-Deschmann, M. (2018). Unraveling the mycoparasitic interaction between Trichoderma atroviride and a fungal prey. 11#^{th} International Mycological Congress, San Juan, United States of America (the). http://hdl.handle.net/20.500.12708/100924 ( reposiTUm)

Holzlechner, M., Reitschmidt, S., Gruber, S., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2017). Visualizing Fungal Metabolites during Mycoparasitic Interaction by MALDI MSI. 28th Mass Spec Forum Vienna, Vienna, Austra, Austria. http://hdl.handle.net/20.500.12708/100564 ( reposiTUm)

Holzlechner, M., Zoratto, S., Reitschmidt, S., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2016). Mass Spectrometry Imaging To Better Understand The Mycoparasitic Interaction Of Biocontrol Agents. 64th American Society of Mass Spectrometry Conference, San Antonio, Texas, United States of America (the). http://hdl.handle.net/20.500.12708/100167 ( reposiTUm)

Nemes, A., Reitschmidt, S., Hartmanova, M., Lemr, K., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2015). From Proteomics to Mass Spectrometry Imaging - The Study of Mycoparasitic Interactions. 14th International Congress on Amino Acids, Peptides and Proteins, Wien, Austria. http://hdl.handle.net/20.500.12708/99891 ( reposiTUm)

Reitschmidt, S., Zeratto, S., Hartmanova, M., Lemr, K., Allmaier, G., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2015). Studying fungal proteome and surface changes during host-pathogen interaction. 9th Central and Eastern European Proteomics Conference, Poznan, Poland. http://hdl.handle.net/20.500.12708/99887 ( reposiTUm)

Nemes, A., Reitschmidt, S., Hartmanova, M., Lemr, K., Zeilinger-Migsich, S., & Marchetti-Deschmann, M. (2015). From Proteomics to Mass Spectrometry Imaging - The Study of Mycoparasitic Interactions. IX Annual Congress - EuPA, Mailand, Italy. http://hdl.handle.net/20.500.12708/99888 ( reposiTUm)

Zeilinger, S., Nemes, A., Labaj, P., Marchetti-Deschmann, M., Kreil, D., & Gruber, S. G. (2014). How MAP kinase signaling regulates the transcriptomic and proteomic response of the biocontrol fungus Trichoderma atroviride. 5#^{th} World Congress on Biotechnology, Valencia, Spain. http://hdl.handle.net/20.500.12708/99461 ( reposiTUm)

Zeilinger, S., Gruber, S. G., Escobar Rodriguez, C., Labaj, P., & Kreil, D. (2014). Dissecting the role of the 7-transmembrane receptor Gpr1 in the biocontrol fungus Trichoderma atroviride using a transcriptomics approach. 5#^{th} World Congress on Biotechnology, Valencia, Spain. http://hdl.handle.net/20.500.12708/99462 ( reposiTUm)

Neumann, N. K., Stoppacher, N., Zeilinger, S., Degenkolb, T., Brückner, H., & Schuhmacher, R. (2014). The Peptaibiotics Database Directory. 33#^{rd} European Peptide Symposium, Sofia, Bulgaria. http://hdl.handle.net/20.500.12708/99463 ( reposiTUm)

Zeilinger, S., & Gruber, S. G. (2014). The transcription factor TaSte12 mediates the regulatory role of the Tmk1 MAP kinase in mycoparasitism and vegetative hyphal fusion in Trichoderma atroviride. VAAM-Jahrestagung 2014 und 66. Jahrestagung der DGHM, Dresden, Germany. http://hdl.handle.net/20.500.12708/99197 ( reposiTUm)

Bruckner, B., Gaderer, R., Nemes, A., Allmaier, G., Zeilinger, S., & Marchetti-Deschmann, M. (2012). Identification of phosphoproteins expressed during mycoparasitism: evaluation of sample preparatio methods for MALDI-RTOF-MS analysis of phosphopeptides. 10th Austrian Proteomic Research Symposium, Graz, Austria. http://hdl.handle.net/20.500.12708/98992 ( reposiTUm)

Nemes, A., Radebner, T., Omann, M., Rehulka, P., Allmaier, G., Zeilinger, S., & Marchetti-Deschmann, M. (2011). The biocontrol fungus Trichoderma atroviride : a first approach to target proteome changes during mycoparasitism. 9th Austrian Proteomics Research Symposium - Special focus on clinical proteomics, Wien, Austria. http://hdl.handle.net/20.500.12708/98606 ( reposiTUm)

Stoppacher, N., Reithner, B., Omann, M., Zeilinger, S., Brunner, K., Mach, R. L., Krska, R., & Schuhmacher, R. (2007). Identification and sequencing of Trichorzianines produced by Trichoderma atroviride. 15th International Reinhardsbrunn Symposium - Modern Fungicides and Antifungal Compounds, Friedrichroda, Germany, EU. http://hdl.handle.net/20.500.12708/97669 ( reposiTUm)

Stoppacher, N., Reithner, B., Omann, M., Zeilinger, S., Brunner, K., Mach, R. L., Krska, R., & Schuhmacher, R. (2007). Detection and Characterization of Peptaibols in Trichoderma atroviride Culture Samples by LC-MS/MS. MassSpec - Forum - Vienna, Wien, Austria. http://hdl.handle.net/20.500.12708/97670 ( reposiTUm)

Schuhmacher, R., Stoppacher, N., Reithner, B., Omann, M., Zeilinger, S., & Krska, R. (2007). Peptaibol profiles in cultures of Trichoderma atroviride: Detection and characterization by LC-MS/MS. 15th International Reinhardsbrunn Symposium - Modern Fungicides and Antifungal Compounds, Friedrichroda, Germany, EU. http://hdl.handle.net/20.500.12708/97668 ( reposiTUm)

Reithner, B., Schuhmacher, R., & Zeilinger, S. (2005). The role of Tga1, a Gα subunit, in biocontrol of Trichoderma atroviride. VAAM - Symposium, Bochum, Austria. http://hdl.handle.net/20.500.12708/96868 ( reposiTUm)

Zeilinger, S., Schmoll, M., Pail, M., Mach, R. L., & Kubicek, C. P. (2002). C.P. Involvement of chromatin rearrangements in the regulation of Hypocrea jecorina (Trichoderma reesei) cellulase promoter cbh2. Joint Trichoderma - Gliogladium and Tricell Meeting, Cancun, Mexico, Austria. http://hdl.handle.net/20.500.12708/95950 ( reposiTUm)

Zeilinger, S., Schmoll, M., Pail, M., Mach, R. L., & Kubicek, C. P. (2002). Nucleosome transactions on the Hypocrea jecorina ebh2 promoter reveal a novel role for the carbon catabolite repressor protein Cre1 in chromatin rearrangement. 6#^{th} European Conference on Fungal Genetics, Pisa, Italy, Austria. http://hdl.handle.net/20.500.12708/98161 ( reposiTUm)

Mach, R. L., Payer, K., Zeilinger, S., Galhaup, C., Jaksits, S., Lorito, M., & Kubicek, C. P. (1998). Trichoderma harzianum chitinases and their function in the regulation of biocontrol . 1.Symposium on Phytopathologie in Horticulture, Vienna ,Austria, Austria. http://hdl.handle.net/20.500.12708/96294 ( reposiTUm)

Mach, R. L., Zeilinger, S., Galhaup, C., Payer, K., Fekete, E., Lorito, M., Woo, S. L., & Kubicek, C. P. (1998). The filamentous fungus Trichoderma harzianum is a  potent mycoparasite . COST 835, Athen ,Greece, Austria. http://hdl.handle.net/20.500.12708/96292 ( reposiTUm)

Mach, R. L., Strauss, J., Zeilinger, S., & Kubicek, C. P. (1996). Carbon catabolite repression of xylanase gene expression in Trichoderma reesei interferes with xy1 and xy2 transcription in different ways . 8#^{th} International congress of Mycology Division, Jerusalem , Israel, Austria. http://hdl.handle.net/20.500.12708/96289 ( reposiTUm)

Mach, R. L., Strauss, J., Schindler, M., Zeilinger, S., Adler, A., & Kubicek, C. P. (1995). Glucose repression of xylanase formation by Trichoderma reesei regulates xyn1 but not xyn2 gene expression and is mediated by the Cre1 gene product . EMBO Workshop on the molecular biology of filamentous fungi , genome structure ,maintendance and expression, Ambelside ,UK, Austria. http://hdl.handle.net/20.500.12708/96286 ( reposiTUm)

Zeilinger-Migsich, S., Marchetti-Deschmann, M., & Kreil, D. (2013). BIOGEN: From genes to biocontrol. http://hdl.handle.net/20.500.12708/37928 ( reposiTUm)

Zeilinger, S., Kreil, D., & Marchetti-Deschmann, M. (2013). BIOGEN: From genes to biocontrol (Endbericht). http://hdl.handle.net/20.500.12708/37951 ( reposiTUm)

Nemes, A., Marchetti-Deschmann, M., & Zeilinger, S. (2013). Identification of Regulators of Mycoparasitism in the Biocontrol Fungus Trichoderma atroviride by Phosphoproteomics and Reverse Genetics (Endbericht). http://hdl.handle.net/20.500.12708/37986 ( reposiTUm)

Zeilinger-Migsich, S. (2012). From Genes to Biocontrol: Elucidating Trichoderma atroviride mycoparasitism at the entrance to the post-genomic era (Zwischenbericht). http://hdl.handle.net/20.500.12708/37987 ( reposiTUm)

Zeilinger, S. (2003). Signal transduction in host sensing and mycoparasitic response of Trichoderma harzianum. http://hdl.handle.net/20.500.12708/32185 ( reposiTUm)

Zeilinger, S. (2003). Signaltransduktion in der Wirtserkennung von T. harzianum. http://hdl.handle.net/20.500.12708/32184 ( reposiTUm)

Zeilinger-Migsich, S. (2012). Trichoderma mycoparasitism : unravelling molecular mechanisms and signal transduction processes [Professorial Dissertation, Technische Universität Wien]. reposiTUm. http://hdl.handle.net/20.500.12708/159444 ( reposiTUm)