Prado-López, S., Foroughipour, M., Becker, K., Foroughipour, S. M., Weber, L., Wanzenboeck, H., Sarem, N., & Saghafi, S. (2025). Cytoskeleton imaging of colorectal and lung cancer spheroids using light sheet microscopy. BJC Reports, 3, Article 45. https://doi.org/10.1038/s44276-025-00144-3 ( reposiTUm)

Foroughipour, S. M., Becker, K., Foroughipour, S. M., Ghaffari-Tabrizi-Wizsy, N., Sarem, N., Fuchssteiner, C. F., & Saghafi, S. (2024). Converting a symmetrical Gaussian beam into a thin tunable light sheet. Methods in Microscopy. https://doi.org/10.1515/mim-2024-0006 ( reposiTUm)

Becker, K., Saghafi, S., Pende, M., Hahn, C., & Dodt, H. U. (2022). Visualizing minute details in light-sheet and confocal microscopy data by combining 3D rolling ball filtering and deconvolution. Journal of Biophotonics, 15(2). https://doi.org/10.1002/jbio.202100290 ( reposiTUm)

Saghafi, S., Becker, K., Gori, F., Foroughipour, M., Bollwein, C., Foroughipour, S. M., Steiger, K., Weichert, W., & Dodt, H. U. (2022). Engineering a better light sheet in an axicon-based system using a flattened Gaussian beam of low order. Journal of Biophotonics, 15(6), Article e202100342. https://doi.org/10.1002/jbio.202100342 ( reposiTUm)

Korchynska, S., Rebernik Patrick, Pende, M., Boi Laura, Alpár Alán, Tasan Ramon, Becker, K., Balueva Kira, Saghafi, S., Wulff Peer, Horvath Tamas L, Fisone, G., Dodt, H. U., Hökfelt, T., Harkany, T., & Romanov, R. A. (2022). A hypothalamic dopamine locus for psychostimulant-induced hyperlocomotion in mice. Nature Communications, 13, Article 5944. https://doi.org/10.1038/s41467-022-33584-3 ( reposiTUm)

Sabdyusheva Litschauer, I., Becker, K., Saghafi, S., Ballke, S., Bollwein, C., Foroughipour, M., Gaugeler, J., Foroughpour, S. M., Schavelová, V., László, V., Döme, B., Brostjan, C., Weichert, W., & Dodt, H. U. (2020). 3D histopathology of human tumours by fast clearing and ultramicroscopy. Scientific Reports, 10(17619). https://doi.org/10.1038/s41598-020-71737-w ( reposiTUm)

Pende, M., Vadiwala, K., Schmidbaur, H., Stockinger, A. W., Murawala, P., Saghafi, S., Dekens, M. P. S., Becker, K., Revilla-i-Domingo, R., Papadopoulos, S.-C., Zurl, M., Pasierbek, P., Simakov, O., Tanaka, E. M., Raible, F., & Dodt, H. U. (2020). A versatile depigmentation, clearing, and labeling method for exploring nervous system diversity. Science Advances, 6(22). https://doi.org/10.1126/sciadv.aba0365 ( reposiTUm)

Hahn, C., Becker, K., Saghafi, S., Pende, M., Avdibašić, A., Foroughipour, S. M., Heinz, D. E., Wotjak, C. T., & Dodt, H. U. (2019). High-resolution imaging of fluorescent whole mouse brain using stabilised organic media (sDISCO). Journal of Biophotonics, 12(8). https://doi.org/10.1002/jbio.201800368 ( reposiTUm)

Becker, K., Saghafi, S., Pende, M., Sabdyusheva Litschauer, I., Hahn, C. M., Foroughipour, S. M., Jährling, N., & Dodt, H. U. (2019). Deconvolution of light sheet microscopy recordings. Scientific Reports, 9, Article 17625. https://doi.org/10.1038/s41598-019-53875-y ( reposiTUm)

Pende, M., Becker, K., Wanis, M., Saghafi, S., Kaur, R., Hahn, C., Pende, N., Foroughipour, M., Hummel, T., & Dodt, H.-U. (2018). high-resolution ultramicroscopy of the developing and adult nervous system in optically cleared drosophila melanogaster. Nature Communications, 9(4731). https://doi.org/10.1038/s41467-018-07192-z ( reposiTUm)

Saghafi, S., Haghi-Danaloo, N., Becker, K., Sabdyusheva, I., Foroughipour, M., Hahn, C., Pende, M., Wanis, M., Bergmann, M., Stift, J., Hegedus, B., Dome, B., & Dodt, H.-U. (2018). Reshaping a multimode laser beam into a constructed Gaussian beam for generating a thin light sheet. Journal of Biophotonics, 11(6), Article e201700213. https://doi.org/10.1002/jbio.201700213 ( reposiTUm)

Saghafi, S., Becker, K., Hahn, C., Pende, M., Jährling, N., Sabdyusheva Litschauer, I., Foroughpour, S. M., Niendorf, A., & Dodt, H. U. (2016). Outlook on optimizing Ultramicroscopy imaging technique through optical characterization. Microscopy Research & Technique, 1, 1–7. http://hdl.handle.net/20.500.12708/149353 ( reposiTUm)

Bulantová, J., Macháček, T., Panská, L., Krejčí, F., Karch, J., Jährling, N., Saghafi, S., Dodt, H.-U., & Horák, P. (2016). Trichobilharzia regenti (Schistosomatidae): 3D imaging techniques in characterization of larval migration through the CNS of vertebrates. Micron, 83, 62–71. https://doi.org/10.1016/j.micron.2016.01.009 ( reposiTUm)

Dodt, H.-U., Saghafi, S., Becker, K., Jährling, N., Hahn, C., Pende, M., Wanis, M., & Niendorf, A. (2015). Ultramicroscopy: development and outlook. NEUROPHOTONICS, 2(4), 041407. https://doi.org/10.1117/1.nph.2.4.041407 ( reposiTUm)

Becker, K., Hahn, C. M., Saghafi, S., Jährling, N., Wanis, M., & Dodt, H.-U. (2014). Reduction of Photo Bleaching and Long Term Archiving of Chemically Cleared GFP-Expressing Mouse Brains. PLoS ONE, 9(12), e114149. https://doi.org/10.1371/journal.pone.0114149 ( reposiTUm)

Saghafi, S. (2013). Light Sheet Ulrtramicroscopy. Imaging & Microscopy, 15, 22–23. http://hdl.handle.net/20.500.12708/155489 ( reposiTUm)

Ferdosizadeh, L., Sadat-Noori, S. A., Zare, N., & Saghafi, S. (2013). Assessment of Diode Laser Pretreatments on Germination and Yield of Wheat (Triticum aestivum L.) under Salinity Stress. World Journal of Agricultural Sciences, 1(1), 5–9. http://hdl.handle.net/20.500.12708/155490 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., & Dodt, H.-U. (2013). Immunostaining, Dehydration and Clearing of Mouse Embryos for Ultramicroscopy. Cold Spring Harbor Protocols, 2013(8), pdb.prot076521. https://doi.org/10.1101/pdb.prot076521 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., & Dodt, H.-U. (2013). Ultramicroscopy: Light-Sheet-Based Microscopy for Imaging Centimeter-Sized Objects with Micrometer Resolution. Cold Spring Harbor Protocols, 2013(8), pdb.top076539. https://doi.org/10.1101/pdb.top076539 ( reposiTUm)

Penjweini, R., Mokmeli, S., Becker, K., Dodt, H. U., & Saghafi, S. (2013). Effects of UV-, Visible-, Near-Infrared Beams in Three Therapy Resistance Case Studies of Fungal Skin infections. Optics and Photonics Journal, 3. http://hdl.handle.net/20.500.12708/155616 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., & Dodt, H.-U. (2013). Dehydration and Clearing of Whole Mouse Brains and Dissected Hippocampi for Ultramicroscopy. Cold Spring Harbor Protocols, 2013(7), pdb.prot075820. https://doi.org/10.1101/pdb.prot075820 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., & Dodt, H.-U. (2013). Dehydration and Clearing of Adult Drosophila for Ultramicroscopy. Cold Spring Harbor Protocols, 2013(7), pdb.prot075812. https://doi.org/10.1101/pdb.prot075812 ( reposiTUm)

Saghafi, S., Becker, K., Hahn, C., & Dodt, H. U. (2013). 3D-ultramicroscopy utilizing aspheric optics. Journal of Biophotonics, 1, 1–9. http://hdl.handle.net/20.500.12708/155491 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., Weiler, R., & Dodt, H.-U. (2012). Chemical Clearing and Dehydration of GFP Expressing Mouse Brains. PLoS ONE, 7(3), e33916. https://doi.org/10.1371/journal.pone.0033916 ( reposiTUm)

Jährling, N., & Saghafi, S. (2011). Ultramicroscopy - a novel light sheet based imaging technique created by various research disciplines. Elektrotechnik Und Informationstechnik : E & i, 128(10), 352–358. https://doi.org/10.1007/s00502-011-0045-1 ( reposiTUm)

Ehsani, A. H., Saghafi, S., Ghoranneviss, M., Hantezadeh, M. R., Hosseini, H., & Dodt, H. U. (2010). Alteration of optical and morphological properties of polycarbonate illuminated by visible/IR laser beams. Journal of the European Optical Society, 5, 1003251–1003256. http://hdl.handle.net/20.500.12708/167542 ( reposiTUm)

Saghafi, S., Penjweini, R., Becker, K., Kratky, K. W., & Dodt, H. U. (2010). Investigating the effects of laser beams (532 nm and 660 nm) in annihilation of pistachio mould fungus using spectrophotometry analysis. Journal of the European Optical Society, 5, 1003351–1003358. http://hdl.handle.net/20.500.12708/167543 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., Richter, M., Kramer, E. R., & Dodt, H.-U. (2010). Image enhancement in ultramicroscopy by improved laser light sheets. Journal of Biophotonics, 3(10–11), 686–695. https://doi.org/10.1002/jbio.201000047 ( reposiTUm)

Saghafi, S., Foroughipour, S. M., Foroughipour, M., Prado-López, S., Oakes, J., & Becker, K. (2025). Beam width tunability using refractive optics in static light sheet microscopy. In K. Fliegel & V. Prajzler (Eds.), Photonics, Devices, and Systems IX : Proceedings of SPIE. https://doi.org/10.1117/12.3072732 ( reposiTUm)

Saghafi, S., Foroughipour, S. M., Foroughipour, M., & Becker, K. (2025). Meso-Aspheric based tunable light-sheet microscopy: reliable technique for precision imaging of neural and vascular network. In FENS Regional Meeting 2025 : Abstract book (pp. 383–384). https://doi.org/10.34726/11241 ( reposiTUm)

Becker, K., & Saghafi, S. (2025). Neurodeblur: A novel software for fast and accurate deconvolution of large light-sheet, confocal, or bright-field microscopy stacks. In FENS Regional Meeting 2025 : Abstract book (pp. 461–461). https://doi.org/10.34726/11239 ( reposiTUm)

Foroughipour, S. M., Sarem, S. N., Foroughipour, M., Becker, K., Kaniusas, E., Ghaffari-Tabrizi-Wizsy, N., & Saghafi, S. (2024). High-resolution 3D-imaging of biological tissues using Conic-Aspheric-Fresnel Light sheet fluorescence microscopy (CAF-LSFM). In International Student Congress: Abstract Book 2024 (pp. 95–95). http://hdl.handle.net/20.500.12708/204588 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Pende, M., Sabdyusheva-Litschauer, I., & Foroughipour, M. (2019). Fast nearly isotropic imaging of drosophilia and mouse brains by ultramicroscopy. In Proceedings of SPIE Vol. 10865 (p. 1). http://hdl.handle.net/20.500.12708/76566 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Pende, M., Sabdyusheva-Litschauer, I., & Foroughipour, M. (2018). Fast nearly isotropic imaging of large samples with light sheets beyond the diffraction limit. In 10th Anniversary Light Sheet Fluorescence Microscopy Conference (p. 8). http://hdl.handle.net/20.500.12708/76447 ( reposiTUm)

Hahn, C., Becker, K., Pende, M., Saghafi, S., Sabdyusheva-Litschauer, I., & Dodt, H. U. (2017). Optical tissue clearing using stabilized organic media allows bleaching- free deep-tissue imaging of fluorescent whole mouse brain. In AXON 2017 Program and Abstracts (p. 47). http://hdl.handle.net/20.500.12708/76068 ( reposiTUm)

Saghafi, S., Haghi-Danaloo, N., Becker, K., Foroughpour, S. M., & Dodt, H. U. (2017). Characterizing output beam of a multimode laser using modal analysis method. In E. Beaurepaire, F. S. Pavone, & P. T. C. So (Eds.), Advances in Microscopic Imaging (pp. 1–6). SPIE. https://doi.org/10.1117/12.2286083 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., Hahn, C., & Dodt, H. U. (2015). Recent developments in light sheet ultramicroscopy imaging techniques. In Technical Programms (pp. 953601–953607). http://hdl.handle.net/20.500.12708/75038 ( reposiTUm)

Dodt, H. U., Hahn, C., Becker, K., Saghafi, S., Jährling, N., Pende, M., Sabdyusheva Litschauer, I., & Wanis, M. (2015). Ultramicroscopy of large samples with improved clearing. In 2nd LightSheet Fluorescence Microscopy International Conference (p. 31). http://hdl.handle.net/20.500.12708/74999 ( reposiTUm)

Dodt, H. U., Hahn, C., Saghafi, S., Becker, K., Jährling, N., Pende, M., Sabdyusheva Litschauer, I., & Wanis, M. (2015). Ultramicroscopy of large samples with improved clearing and optics. In 1st UltraMicroscope User Meeting (p. 13). http://hdl.handle.net/20.500.12708/74995 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., Hahn, C., & Dodt, H. U. (2015). Optimization in ultramicroscopy imaging technique through laser light sheet enhancement. In 2nd LightSheet Fluorescence Microscopy International Conference (p. 34). http://hdl.handle.net/20.500.12708/74998 ( reposiTUm)

Jährling, N., Becker, K., Wegenast-Braun, B., Grathwohl, S., Jucker, M., Kramer, E., Saghafi, S., Hahn, C., & Dodt, H. U. (2015). Technical advances in ultramicroscopy and their application for investigating neuronal development and diseases. In Proceedings 11th Göttingen Meeting of the German Neuroscience Society (p. 1). Neuroforum March 2015. http://hdl.handle.net/20.500.12708/74645 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Jährling, N., & Hahn, C. (2015). Imaging of whole mouse brains with the ultramicroscope. In Annual Meeting of the German Physiological Society (p. 36). http://hdl.handle.net/20.500.12708/75000 ( reposiTUm)

Dodt, H. U., Becker, K., Hahn, C., & Saghafi, S. (2014). IT-3-0-1457 Imaging of cleared biological samples with the Ultramicroscope. In 18th International Microscopy Congress Proceedings (p. 316). http://hdl.handle.net/20.500.12708/74468 ( reposiTUm)

Saghafi, S., Becker, K., Hahn, C., & Dodt, H. U. (2012). Recent development in light Ultramicroscopy using aspherical optical elements. In L. Mazuray, R. Wartmann, A. P. Wood, M. C. de la Fuente, J.-L. M. Tissot, J. M. Raynor, D. G. Smith, F. Wyrowski, A. Erdmann, T. E. Kidger, S. David, & P. Benitez (Eds.), Optical Systems Design 2012 (p. 1). SPIE. https://doi.org/10.1117/12.980904 ( reposiTUm)

Dodt, H. U., Jährling, N., Saghafi, S., & Becker, K. (2011). Ultramicroscopy: 3D-reconstruction of Drosophila’s inner anatomy with improved optics. In Proceedings (pp. 18–19). http://hdl.handle.net/20.500.12708/72653 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., & Dodt, H. U. (2010). Image improvement by a new light sheet generation system in Ultramicroscopy. In EOS Annual Meeting 2010 (EOSAM 2010) (pp. 1–2). http://hdl.handle.net/20.500.12708/71911 ( reposiTUm)

Ehsani, A. H., Saghafi, S., Goranneviss, M., Hantezadeh, M. R., Seyf, P., & Dodt, H. U. (2010). Optical Modifications of SiO2 Thin Film coated on Polycarbonate caused by VIS-IR Laser Illumination. In 60th Annual Meeting Austrian Physical Society. 60th Annual Meeting Austrian Physical Society, Salzburg, Austria. http://hdl.handle.net/20.500.12708/71920 ( reposiTUm)

Penjweini, R., Mohajer, F., Geranmayeh, A., Kratky, K. W., & Saghafi, S. (2010). Characterizing the Effects of Combinations of Visible-Infrared Laser Beam and Blue/Red-Led-Arrays on Albican Candida and Pityriasis Versicolor Distruction. In 60th Annual Meeting Austrian Physical Society (pp. 126–127). http://hdl.handle.net/20.500.12708/71921 ( reposiTUm)

Dodt, H. U., Jährling, N., Saghafi, S., Kalchmair, S., & Becker, K. (2009). Visualization of neuronal networks in the whole mouse brain and mouse embryos by ultramiroscopy. In Proceedings. Topical problems of Biophotonics, Nizhny Novgorod, Russia, Non-EU. http://hdl.handle.net/20.500.12708/71061 ( reposiTUm)

Saghafi, S., Penjweini, R., Ghoranneviss, M., & Dodt, H. U. (2009). Investigating the effects of flat-top laser beams (532 and 660 nm) in annihilation of pistachio mold fungus using spectrophotometry analysis. In On-Site Programme. EOS Topical Meetings in Capri, Frankreich, Paris, EU. http://hdl.handle.net/20.500.12708/71080 ( reposiTUm)

Saghafi, S., Ehsani, A. H., Ghoranneviss, M., Hosseini, H., Hantezadeh, M. R., Dorranian, D., & Dodt, H. U. (2008). Influence of visible-IR lasers on optical properties and surface morphology of polycarbonate surface. In On-Site Programme (pp. 1–3). http://hdl.handle.net/20.500.12708/71079 ( reposiTUm)

Pende, M., Saghafi, S., Becker, K., Hummel Thomas, & Dodt, H.-U. (2022). FlyClear: A Tissue-Clearing Technique for High-Resolution Microscopy of Drosophila. In C. Dahmann (Ed.), Drosophila Methods and Protocols (pp. 349–359). Springer. https://doi.org/10.1007/978-1-0716-2541-5_18 ( reposiTUm)

Becker, K., Hahn, C., Jährling, N., Pende, M., Sabdyusheva Litschauer, I., Saghafi, S., Wanis, M., & Dodt, H. U. (2020). Chemical Clearing of Brains. In Handbook of Neurophotonics (Series in Cellular and Clinical Imaging) (pp. 191–219). CRC Press. http://hdl.handle.net/20.500.12708/30340 ( reposiTUm)

Becker, K., Saghafi, S., Hahn, C., Jährling, N., & Dodt, H.-U. (2018). Chemical Clearing of GFP-Expressing Neural Tissues. In Neuromethods (pp. 183–199). Springer. https://doi.org/10.1007/978-1-0716-0428-1_6 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., Hahn, C., & Dodt, H.-U. (2018). Ultramicroscopy of Nerve Fibers and Neurons: Fine-Tuning the Light Sheets. In Neuromethods (pp. 325–339). Springer. https://doi.org/10.1007/978-1-0716-0428-1_11 ( reposiTUm)

Jährling, N., Becker, K., Saghafi, S., & Dodt, H. U. (2017). Light-Sheet Fluorescence Microscopy:Chemical Clearing and Labeling Protocols for Ultramicroscopy. In Light Microscopy (pp. 33–49). Springer. http://hdl.handle.net/20.500.12708/29535 ( reposiTUm)

Becker, K., Jährling, N., Saghafi, S., & Dodt, H. U. (2011). Ultramicroscopy; Light-Sheet-Based Microscopy for Imaging Centimeter-Sized Objects with Micrometer Resolution. In Imaging (pp. 757–771). Cold Spring Harbor Laboratory. http://hdl.handle.net/20.500.12708/27460 ( reposiTUm)

Saghafi, S., Foroughipour, M., Foroughipour, M., Oakes, J., & Becker, K. (2025, June 9). Designing a tunable light sheet generator with enhanced optical characteristics [Conference Presentation]. Photonics Prague 2025-9th International Conference on Photonics, Devices and Systems, Prague, Czechia. http://hdl.handle.net/20.500.12708/219783 ( reposiTUm)

Saghafi, S. (2025, July 4). General Laser Safety Awareness for Various Applications [Presentation]. FKE Seminar _Safety Training, Wien, Austria. http://hdl.handle.net/20.500.12708/219904 ( reposiTUm)

Becker, K., & Saghafi, S. (2024, June 29). NeuroDeblur: A novel software for fast deconvolution of large light-sheet, confocal, or bright-field microscopy stacks [Poster Presentation]. FENS 2024, Vienna, Austria. ( reposiTUm)

Oakes, J. A., Saghafi, S., Wöhrer, A., Widhalm, G., & Dodt, H. U. (2024, June 26). LIGHT SHEET MICROSCOPY AND FLUORESCENT LABELLING OF GLIOBLASTOMA MULTIFORME FOR 3D VIRTUAL H&E IMAGING AND IMPROVED PATHOHISTOLOGICAL EVALUATION [Poster Presentation]. FENS-Forum 2024, Wien, Austria. http://hdl.handle.net/20.500.12708/210091 ( reposiTUm)

Böhm, S., Solano Mateos, M., Oakes, J. A., Saghafi, S., Fuchssteiner, C. F., Klausberger, T., & Dodt, H. U. (2024, June 26). COMBINING ELECTROPHYSIOLOGY, TISSUE CLEARING, AND LIGHT SHEET MICROSCOPY FOR AN INTEGRATED APPROACH TOWARDS BRAIN CIRCUIT UNDERSTANDING [Poster Presentation]. FENS Forum 2024, Wien, Austria. http://hdl.handle.net/20.500.12708/210071 ( reposiTUm)

Dodt, H.-U., Oakes, J. A., Fuchssteiner, C. F., Böhm, S., Abd El-Ghany, K., & Saghafi, S. (2024, July 8). Towards the elucidation of the human connectome by clearing and light sheet microscopy [Keynote Presentation]. Neuroscience and Neurotechnology in Freiburg (Talks-Lectures-Events), Freiburg, Germany. http://hdl.handle.net/20.500.12708/210037 ( reposiTUm)

Becker, K., Saghafi, S., & Dodt, H. U. (2022, July 13). The Wiener Deconvolution Tools: A novel software for deconvolving light sheet and confocal microscopy data. [Poster Presentation]. FENS Meeting 2022, Expo Porte de Versailles Pavillon 7, France. ( reposiTUm)

Jährling, N., Becker, K., Saghafi, S., Wegenast-Braun, B., Grathwohl, S., Kramer, E., Weiler, R., & Dodt, H. U. (2018). Advances in Ultramicroscopy and its application in neuroscience. International Neuroscience Winter Conference, Sölden, Austria. http://hdl.handle.net/20.500.12708/91050 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Pende, M., Sabdyusheva-Litschauer, I., & Foroughipour, M. (2018). Fast isotropic imaging of whole mouse brains with ultramicroscopy by breaking the diffraction limit of light sheets. 11th FENS Forum of Neuroscience, Berlin, Germany. http://hdl.handle.net/20.500.12708/91132 ( reposiTUm)

Saghafi, S., Haghi-Danaloo, N., Becker, K., Foroughpour, S. M., & Dodt, H. U. (2017). Reshaping Multimode Laser Beam into a Thin Light Sheet Using Conic-Aspheric Elements. European Conferences on Biomedical Optics, München, Germany. http://hdl.handle.net/20.500.12708/91038 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Sabdyusheva Litschauer, I., Pende, M., Wanis, M., & Foroughpour, S. M. (2017). 10 Years Of Ultramicroscopy: Optics, Brains And Cancer. Focus on Microscopy (FOM), Krakau, Poland. http://hdl.handle.net/20.500.12708/91037 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Pende, M., Sabdyusheva Litschauer, I., Wanis, M., & Foroughpour, S. M. (2017). Fast recording of whole mouse brains with aspheric light sheet microscopy. International ELMI meeting, Dubrovnik, Croatia. http://hdl.handle.net/20.500.12708/91031 ( reposiTUm)

Pende, M., Becker, K., Wanis, M., Saghafi, S., Kaur, R., Hahn, C., Hummel, T., & Dodt, H. U. (2017). Light sheet microscopy of cleared and fluorescently labeled whole adult fruit fly Drosophila melanogaster. Annual Meeting of the Austrian Neuroscience Association, Wien, Austria. http://hdl.handle.net/20.500.12708/91033 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Pende, M., Hahn, C., Sabdyusheva Litschauer, I., & Wanis, M. (2017). Isotropic recording of whole mouse brains by light sheet microscopy breaking the di􀃗raction limit. Neuroscience, San Diego, United States of America (the). http://hdl.handle.net/20.500.12708/90994 ( reposiTUm)

Dodt, H. U., Saghafi, S., Hahn, C., Becker, K., Pende, M., Sabdyusheva Litschauer, I., & Wanis, M. (2016). Fast recording of whole mouse brains with aspheric light sheet microscopy. Exner Lecture, Wien, Austria. http://hdl.handle.net/20.500.12708/90873 ( reposiTUm)

Dodt, H. U., Saghafi, S., Becker, K., Hahn, C., Pende, M., Wanis, M., & Sabdyusheva Litschauer, I. (2016). Rapid imaging of whole mouse brains by asperic light sheet microscopy. Forum of Neuroscience, Kopenhagen, Denmark. http://hdl.handle.net/20.500.12708/90872 ( reposiTUm)

Dodt, H. U., Saghafi, S., Hahn, C., Becker, K., Pende, M., Sabdyusheva Litschauer, I., & Wanis, M. (2016). 94.01 / KKK44 - Fast recording of whole mouse brains with aspheric light sheet microscopy. Neuroscience, San Diego, United States of America (the). http://hdl.handle.net/20.500.12708/90874 ( reposiTUm)

Jährling, N., Saghafi, S., Becker, K., Sabdyusheva, I., Wanis, M., & Dodt, H. U. (2015). Ultramicroscopy in neuroscience. Gemeinsame Jahrestagung 2015 der ÖPG, SPS, ÖGA und SSAA in Wien, Wien, Austria. http://hdl.handle.net/20.500.12708/90564 ( reposiTUm)

Dodt, H. U., Becker, K., Hahn, C., & Saghafi, S. (2014). Improved Imaging of cleared biological samples with the ultramicroscope. 9th FENS Forum of Neuroscience, Mailand, Italy. http://hdl.handle.net/20.500.12708/90481 ( reposiTUm)

Dodt, H. U., Hahn, C., Jährling, N., Saghafi, S., & Becker, K. (2014). Visualization of neuronal networks in the mouse brain, spinal cord and mouse embryos by ultramicroscopy. The 16th Spinal Research Network Meeting, London, United Kingdom of Great Britain and Northern Ireland (the). http://hdl.handle.net/20.500.12708/90474 ( reposiTUm)

Dodt, H. U., Becker, K., Hahn, C., Jährling, N., & Saghafi, S. (2014). Imaging of cleared biological samples with the Ultramicroscope. 1st LightSheet Fluorescence Microscopy International Conference, Barcelona, Spain. http://hdl.handle.net/20.500.12708/90475 ( reposiTUm)

Dodt, H. U., Jährling, N., Saghafi, S., Hahn, C., & Becker, K. (2014). Visualisation of neuronal networks in the mouse brain and mouse embryos by ultramicroscopy. 2nd International Summer School of the SFB 944, Osnabrück, Germany. http://hdl.handle.net/20.500.12708/90470 ( reposiTUm)

Dodt, H. U., Becker, K., Hahn, C., Jährling, N., & Saghafi, S. (2014). Optics for the imaging of cleared samples. Annual Meeting Society of Neuroscience, Washington DC, United States of America (the). http://hdl.handle.net/20.500.12708/90476 ( reposiTUm)

Hahn, C., Becker, K., Saghafi, S., Wanis, M., & Dodt, H. U. (2013). Reduction of photobleaching and long term archiving of chemically cleared GFP-expressing mouse brains. Neuroscience Vienna Network Meeting, Wien, Austria. http://hdl.handle.net/20.500.12708/90138 ( reposiTUm)

Saghafi, S., Becker, K., Hahn, C., & Dodt, H. U. (2013). Advances in Ultramicroscopy Imaging Technique. International Multidisciplinary Microscopy Congress (InterM), Antalya, Turkey. http://hdl.handle.net/20.500.12708/90137 ( reposiTUm)

Dodt, H. U., Becker, K., Hahn, C., & Saghafi, S. (2013). Imaging of cleared biological samples with the Ultramicroscope. International Symposium FRONTIERS In Neurophotonics, Talence, France. http://hdl.handle.net/20.500.12708/90197 ( reposiTUm)

Jährling, N., Auer, C., Tabatabai, G., Hahn, C., Saghafi, S., Becker, K., & Dodt, H. U. (2012). Ultramicroscopy (UM): 3D reconstructions of vascular networks in mice using lectin-staining. 8th YSA-PhD-Symposium, Wien, Austria. http://hdl.handle.net/20.500.12708/89987 ( reposiTUm)

Jährling, N., Becker, K., Saghafi, S., & Dodt, H. U. (2012). 3D Imaging of vascular networks in mouse brains using ultramicroscopy (UM). 54th Symposium of the Society for Histochemistry, wien, Austria. http://hdl.handle.net/20.500.12708/89988 ( reposiTUm)

Jährling, N., Saghafi, S., Ertürk, A., Mauch, C. P., Auer, C., Becker, K., & Dodt, H. U. (2012). Ultramicroscopy: 3D-reconstructions of mouse spinal cords. Jahreskongress der Deutschen Gesellschaft für Neurotraumatologie und Klinische Neurorehabilitation e.V., Köln, Germany. http://hdl.handle.net/20.500.12708/89989 ( reposiTUm)

Dodt, H. U., Jährling, N., Saghafi, S., Kalchmair, S., & Becker, K. (2011). Visualization of Neuronal networks in the mouse brain and mouse embryos by ultramicroscopy. Graduate School Meeting, Münster, Deutschland, EU. http://hdl.handle.net/20.500.12708/89737 ( reposiTUm)

Penjweini, R., Kratky, K. W., Dodt, H. U., & Saghafi, S. (2011). Characterizizing the effects of ceoherent laser beams and noncoherent LED beams on annihaliation of bread and fungus. EOS European Optical Society Annual Meeting, Paris, France. http://hdl.handle.net/20.500.12708/89752 ( reposiTUm)

Jährling, N., Saghafi, S., Becker, K., & Dodt, H. U. (2011). Optical characterisation of standard ultramicroscopy system. EOS European Optical Society Annual Meeting, Paris, France. http://hdl.handle.net/20.500.12708/89751 ( reposiTUm)

Saghafi, S., Jährling, N., Becker, K., & Dodt, H. U. (2011). Effects of Gaussian- and Flattened- Gaussian beam in scanning light sheet Ultramicroscopy employing Meso-optical elements. EOS European Optical Society Annual Meeting, Paris, France. http://hdl.handle.net/20.500.12708/89750 ( reposiTUm)

Saghafi, S., Becker, K., Jährling, N., & Dodt, H. U. (2010). New light sheet generator, enhancing image quality in Ultramicroscopy. Light Sheet based Flourescence Microscopy Workshop, Dublin, EU. http://hdl.handle.net/20.500.12708/89405 ( reposiTUm)

Oakes-Klein, J., Saghafi, S., Roetzer-Pejrimovsky, T., Fuchssteiner, C., Grin, K., Kiesel, B., Körner, L., Wöhrer, A., Widhalm, G., & Dodt, H.-U. (2025). pathoDISCO-HE: Towards light sheet microscopy enabled volumetric histopathology of human gliomas. Research Square (United States). https://doi.org/10.34726/11019 ( reposiTUm)

Saghafi, S., Becker, K., & Zacharias, A. (2025). Revolutionizing 3D-Microscopy with Ultra-Precise Laser Beam Shaping [Video]. https://doi.org/10.34726/11319 ( reposiTUm)

Saghafi, S., Foroughipour, S. M., Becker, K., Sabdyusheva Litschauer, I., Foroughipour, S. M., Kaniusas, E., & Dodt, H. U. (2023, February). Challenges in Building a Simple Conic-Based Light Sheet Microscope. Imaging & Microscopy, 2, 14–16. http://hdl.handle.net/20.500.12708/177633 ( reposiTUm)