<div class="csl-bib-body">
<div class="csl-entry">Benedetti, F., Saghaei, T., van Oostrum, P., & Bianchi, E. (2023, December 1). <i>Data-driven inference of colloidal interactions</i> [Poster Presentation]. Vienna Soft Matter Days 2023, Wien, Austria. http://hdl.handle.net/20.500.12708/196924</div>
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dc.identifier.uri
http://hdl.handle.net/20.500.12708/196924
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dc.description.abstract
Forces between colloidal particles cannot generally be measured directly while they contribute to particle movements and ultimately drive self-assembly. We develop methods to infer the forcefield in a colloidal systems from experimentally accessible trajectories.
The motion of colloids is commonly described by the Overdamped Langevin Equation (OLE) for both in- and out-of-equilibrium conditions [1,2,3,4]. According to the OLE, colloidal motion is the sum of two terms: a deterministic motion caused by the total force between the colloid that depends on their (respective) position and a stochastic motion due to the solvent thermal agitation, known as diffusion. Consequently, direct measurement of colloidal motion gives only access to a noisy estimator of the total force and nothing can be said about the different components in the forcefield (i.e external field, pairwise interaction, …). Furthermore, hydrodynamic couplings make the force inference even more complex as it makes the diffusion state dependent while the motion of one colloid becomes correlated with the motion of all the surrounding colloids [3,4,5].
To infer forcefield components from trajectories, it is therefore crucial to infer the hydrodynamic couplings. Following the core idea developed in [6], we introduce a basis with physical inductive biases to capture the different phenomena behind hydrodynamic couplings. Then, using the inferred hydrodynamic couplings, we decorrelate colloidal motions and apply a similarly designed basis to disentangle the different forcefield components.
Within this approach, we validate our method on both passive and active 3D systems simulated using brownian dynamics with hydrodynamics [7]. We show that we are able to get very good quantitative agreements between the exact and inferred hydrodynamic couplings as well as the external field and pairwise interactions.
References:
[1] I. C. Jenkins, Soft Matter, 11, 6948-6956 (2015)
[2] G. Volpe, Rep. Prog. Phys., 79, 053901 (2016)
[3] G. Volpe, Phys. Rev. Lett. 104, 170602 (2010)
[4] G. Pesce, .Phys. Rev. E, 90, 042309 (2014)
[5] E. Wajnryb, Journal of Fluid Mechanics 731, 3 (2013)
[6] A. Frishman, Phys. Rev. X, 10, 021009 (2020)
[7] A. Callegari, In: F. Toschi, M. Sega, (eds) Flowing Matter. Soft and Biological Matter. Springer, Cham. (2019)
en
dc.language.iso
en
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dc.subject
Force inference
en
dc.subject
Colloids
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dc.subject
Brownian motion
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dc.subject
Hydrodynamics
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dc.title
Data-driven inference of colloidal interactions
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dc.type
Presentation
en
dc.type
Vortrag
de
dc.contributor.affiliation
University of Natural Resources and Life Sciences, Vienna, Austria
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dc.contributor.affiliation
University of Natural Resources and Life Sciences, Vienna, Austria
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dc.type.category
Poster Presentation
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tuw.researchTopic.id
C5
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tuw.researchTopic.id
C6
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tuw.researchTopic.name
Computer Science Foundations
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tuw.researchTopic.name
Modeling and Simulation
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tuw.researchTopic.value
75
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tuw.researchTopic.value
25
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tuw.publication.orgunit
E136 - Institut für Theoretische Physik
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tuw.author.orcid
0000-0001-5366-8838
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tuw.author.orcid
0000-0002-2404-7474
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tuw.author.orcid
0000-0003-1964-7587
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tuw.author.orcid
0000-0002-3282-1087
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tuw.event.name
Vienna Soft Matter Days 2023
en
tuw.event.startdate
01-12-2023
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tuw.event.enddate
01-12-2023
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tuw.event.online
On Site
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tuw.event.type
Event for scientific audience
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tuw.event.place
Wien
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tuw.event.country
AT
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tuw.event.institution
Universität Wien
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tuw.event.presenter
Benedetti, Florian
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tuw.event.track
Single Track
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wb.sciencebranch
Physik, Astronomie
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wb.sciencebranch.oefos
1030
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wb.sciencebranch.value
100
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item.cerifentitytype
Publications
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item.languageiso639-1
en
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item.openairecristype
http://purl.org/coar/resource_type/c_18co
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item.grantfulltext
none
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item.fulltext
no Fulltext
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item.openairetype
conference poster not in proceedings
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crisitem.author.dept
E136 - Institut für Theoretische Physik
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crisitem.author.dept
University of Natural Resources and Life Sciences, Vienna, Austria
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crisitem.author.dept
University of Natural Resources and Life Sciences, Vienna, Austria
