<div class="csl-bib-body">
<div class="csl-entry">Le Muzic, M., Autin, L., Parulek, J., & Viola, I. (2015). cellVIEW: a Tool for Illustrative and Multi-Scale Rendering of Large Biomolecular Datasets. In K. Bühler, L. Linsen, & N. W. John (Eds.), <i>VCBM 15: Eurographics Workshop on Visual Computing for Biology and Medicine</i> (pp. 61–70). The Eurographics Association. https://doi.org/10.2312/vcbm.20151209</div>
</div>
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dc.identifier.isbn
978-3-905674-82-8
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dc.identifier.uri
http://hdl.handle.net/20.500.12708/56031
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dc.description.abstract
In this article we introduce cellVIEW, a new system to interactively visualize large biomolecular datasets on the atomic level. Our tool is unique and has been specifically designed to match the ambitions of our domain experts to model and interactively visualize structures comprised of several billions atom. The cellVIEW system integrates acceleration techniques to allow for real-time graphics performance of 60 Hz display rate on datasets representing large viruses and bacterial organisms. Inspired by the work of scientific illustrators, we propose a level-of-detail scheme which purpose is two-fold: accelerating the rendering and reducing visual clutter. The main part of our datasets is made out of macromolecules, but it also comprises nucleic acids strands which are stored as sets of control points. For that specific case, we extend our rendering method to support the dynamic generation of DNA strands directly on the GPU. It is noteworthy that our tool has been directly implemented inside a game engine. We chose to rely on a third party engine to reduce software development work-load and to make bleeding-edge graphics techniques more accessible to the end-users. To our knowledge cellVIEW is the only suitable solution for interactive visualization of large bimolecular landscapes on the atomic level and is freely available to use and extend.
en
dc.language.iso
en
-
dc.title
cellVIEW: a Tool for Illustrative and Multi-Scale Rendering of Large Biomolecular Datasets
en
dc.type
Konferenzbeitrag
de
dc.type
Inproceedings
en
dc.relation.publication
VCBM 15: Eurographics Workshop on Visual Computing for Biology and Medicine
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dc.relation.isbn
978-3-905674-82-8
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dc.relation.issn
2070-5786
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dc.description.startpage
61
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dc.description.endpage
70
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dc.type.category
Full-Paper Contribution
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tuw.booktitle
VCBM 15: Eurographics Workshop on Visual Computing for Biology and Medicine
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tuw.peerreviewed
true
-
tuw.relation.publisher
The Eurographics Association
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tuw.researchTopic.id
I5
-
tuw.researchTopic.name
Visual Computing and Human-Centered Technology
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tuw.researchTopic.value
100
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tuw.publication.orgunit
E193-02 - Forschungsbereich Computer Graphics
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tuw.publisher.doi
10.2312/vcbm.20151209
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dc.description.numberOfPages
10
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tuw.event.name
Workshop on Visual Computing for Biomedicine (VCBM)
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tuw.event.startdate
06-10-2008
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tuw.event.enddate
07-10-2008
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tuw.event.online
On Site
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tuw.event.type
Event for scientific audience
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tuw.event.place
Delft, Niederlande
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tuw.event.country
EU
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tuw.event.presenter
Le Muzic, Mathieu
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wb.sciencebranch
Informatik
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wb.sciencebranch.oefos
1020
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wb.facultyfocus
Visual Computing and Human-Centered Technology (VC + HCT)
de
wb.facultyfocus
Visual Computing and Human-Centered Technology (VC + HCT)
en
wb.facultyfocus.faculty
E180
-
wb.presentation.type
science to science/art to art
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item.fulltext
no Fulltext
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item.openairecristype
http://purl.org/coar/resource_type/c_5794
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item.languageiso639-1
en
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item.cerifentitytype
Publications
-
item.openairetype
conference paper
-
item.grantfulltext
restricted
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crisitem.author.dept
E186 - Institut für Computergraphik und Algorithmen
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crisitem.author.dept
E193-02 - Forschungsbereich Computer Graphics
-
crisitem.author.parentorg
E180 - Fakultät für Informatik
-
crisitem.author.parentorg
E193 - Institut für Visual Computing and Human-Centered Technology